Gene detail information of Glyur000598s00025085 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15900.1 | 3.00E-17 | |
| NR | KEH39628.1 | 9.35E-41 | transmembrane protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072VDU9|A0A072VDU9_MEDTR | 3.00E-41 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH39628.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00598 | 23468 | 24898 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.777 |
| SRR1783600 | control | 42.783 |
| SRR1783602 | moderate drought stress | 58.105 |
| SRR1811619 | moderate drought stress | 59.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.077 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.262 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.100 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 36.916 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.305 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.250 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.440 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.402 |
| SRR2868004 | Drought Stress (root) | 16.430 |
| SRR2967015 | Control (root) | 25.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.265 |
| SRR9715740 | Leaf | 5.399 |
| SRR9715741 | Leaf | 10.183 |
| SRR9715739 | Root | 12.372 |
| SRR9715742 | Root | 11.099 |
| SRR9715743 | Root | 11.518 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.904 |
| SRR8749028 | MeJA induced 9h | 7.192 |
| SRR8749029 | MeJA induced 9h | 5.403 |
| SRR8749030 | Uninduced | 1.953 |
| SRR8749031 | Uninduced | 2.893 |
| SRR8749032 | Uninduced | 12.663 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.367 |
| SRR8400027 | Control - Root | 34.770 |