Gene detail information of Glyur000597s00020335 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02600.2 | 2.00E-174 | Seven transmembrane MLO family protein |
| NR | XP_003522288.1 | 0 | PREDICTED: MLO-like protein 1-like [Glycine max] |
| Swissprot | tr|O49621|MLO1_ARATH | 0 | MLO-like protein 1 |
| trEMBL | tr|I1JSC7|I1JSC7_SOYBN | 0 | MLO-like protein {ECO:0000256|RuleBase:RU280816} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00597 | 135843 | 140279 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000597s00020335.1 | PF03094.10 | Mlo | 7 | 477 | 1.00E-212 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 75.710 |
| SRR1783600 | control | 74.569 |
| SRR1783602 | moderate drought stress | 75.419 |
| SRR1811619 | moderate drought stress | 74.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 33.883 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.333 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.302 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.839 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 35.697 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.385 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.117 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 36.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.556 |
| SRR2868004 | Drought Stress (root) | 39.026 |
| SRR2967015 | Control (root) | 28.999 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 47.093 |
| SRR9715740 | Leaf | 69.836 |
| SRR9715741 | Leaf | 52.916 |
| SRR9715739 | Root | 61.304 |
| SRR9715742 | Root | 45.176 |
| SRR9715743 | Root | 47.543 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 27.850 |
| SRR8749028 | MeJA induced 9h | 26.410 |
| SRR8749029 | MeJA induced 9h | 19.151 |
| SRR8749030 | Uninduced | 7.061 |
| SRR8749031 | Uninduced | 3.829 |
| SRR8749032 | Uninduced | 8.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 111.937 |
| SRR8400027 | Control - Root | 109.536 |