Gene detail information of Glyur000597s00020320 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34925.1 | 1.00E-04 | CLAVATA3/ESR-RELATED 42 |
| NR | ADW77283.1 | 1.36E-30 | CLE29 protein [Glycine max] |
| Swissprot | tr|Q6IWB2|CLE42_ARATH | 3.00E-06 | CLE42p (Precursor) |
| trEMBL | tr|E9L575|E9L575_SOYBN | 5.00E-31 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G05350.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00597 | 54139 | 54513 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.543 |
| SRR1783600 | control | 6.243 |
| SRR1783602 | moderate drought stress | 6.461 |
| SRR1811619 | moderate drought stress | 5.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.870 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.670 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.084 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.207 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.923 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.783 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.887 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.225 |
| SRR2868004 | Drought Stress (root) | 1.355 |
| SRR2967015 | Control (root) | 1.922 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.640 |
| SRR9715740 | Leaf | 0.385 |
| SRR9715741 | Leaf | 1.038 |
| SRR9715739 | Root | 0.479 |
| SRR9715742 | Root | 3.595 |
| SRR9715743 | Root | 1.423 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.284 |
| SRR8400027 | Control - Root | 4.872 |