Gene detail information of Glyur000596s00021330 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G69588.1 | 1.00E-07 | CLAVATA3/ESR-RELATED 45 |
| NR | KHN48688.1 | 8.51E-51 | hypothetical protein glysoja_015836 [Glycine soja] |
| Swissprot | tr|Q6IWA9|CLE45_ARATH | 2.00E-09 | CLE45p (Precursor) |
| trEMBL | tr|I1MTT7|I1MTT7_SOYBN | 2.00E-50 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G10850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00596 | 126239 | 126523 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.638 |
| SRR1783600 | control | 0.504 |
| SRR1783602 | moderate drought stress | 0.134 |
| SRR1811619 | moderate drought stress | 0.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.810 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.493 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.692 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.941 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.652 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.484 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.664 |
| SRR2868004 | Drought Stress (root) | 6.815 |
| SRR2967015 | Control (root) | 8.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.417 |
| SRR9715740 | Leaf | 0.213 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.853 |
| SRR9715743 | Root | 0.721 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.565 |
| SRR8749028 | MeJA induced 9h | 0.171 |
| SRR8749029 | MeJA induced 9h | 0.959 |
| SRR8749030 | Uninduced | 0.448 |
| SRR8749031 | Uninduced | 0.182 |
| SRR8749032 | Uninduced | 0.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.092 |
| SRR8400027 | Control - Root | 3.452 |