Gene detail

Gene detail information of Glyur000596s00021308

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G03220.1	5.00E-180	fucosyltransferase 1
NR	XP_004508724.1	0	PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like [Cicer arietinum]
Swissprot	tr\|Q9M5Q1\|FUT1_PEA	0	Galactoside 2-alpha-L-fucosyltransferase
trEMBL	tr\|A0A072USA9\|A0A072USA9_MEDTR	0	Galactoside 2-alpha-L-fucosyltransferase-like protein {ECO:0000313\|EMBL:KEH31943.1}

Sequence

Transcript Sequence

>Glyur000596s00021308.1
ATGAAGCGGGTCATTGCAATTAGGAATCCACCGGCACCAGGGGAACAATCTGTTAATGATGCCGCCGGGAACAAGCTCTCTCTCTTACCCTCAGATTTGGAAACCGTTAACAATGCCAAATGTGCGTTCCCTCTCACTCTGATGCGTTTGATGGGCTTCTTCGTCGTTTCTTTCGTGCTCTTCTCCTTACTCTTCTCTCTCTCCGTTGTTCTCCGTGACCCTCCCTCTGACGCCGCCCTCCCCCAACCAACTCTCTTCCAACTCAAACATACACAACCAGGTTTGGACAGTGATGCCTCTGATTCTGTAGAGTTGCTAAACGATAAACTGCTTGGTGGCCTTCTAGCTGATGGGTTTGATGAAAAATCTTGTCTCAGCAGGTATCAGTCGGTCATGTATCACAAAGGACTGTCAGGAAAACCTTCTTCTTACCTTATTTCCATATTGAAAAAATATGAAGCTCGACACAAAGAATGTGGACCTTATACCGAATCCTATAACAAGACGGTGAAAGAACTCCGCTCTGGTCAATTTACCGAGCCCTCGGCTTGTAAATATGTTGTGTGGATTTCATATAGTGGGTTAGGGAATAGGATATTGACCCTAGCNTCTGCATTTCTTTATGCTCTCCTCACGGACCGTGTTCTGCTGGTTGACCCTGGAGTGGATATGATTGATCTCTTTTGTGAACCATTTCCAGATGCTTCCTGGTTTCTCCCTCCCGATTTCCCTCTTAACGGTCAATTGCAAAATTTCAACCAGGAATCTCATCAATGCCATGGGAAAATGCTGAAAAATAAAGCAGTTACTAATTCCACTGTGCCATCTCTTGTCTATCTTCATCTAGCCCATGATTATGATGATCATGATAAGCTTTTCTTCTGTGATGAAGAGCAACATTTTCTCCATAAAGTACCTTGGTTAATGATGAGAACAGATAATTACTTCATCCCATCTCTGTTCTTGATGCCGGCTTTTGAGCAAGAACTGAATGATCTCTTCCCAAAGAAGGATACGGTTTTCCATTTCTTGGGTAGATATCTGTTCCACCCCACAAACAATGTATGGGGACTTGTTGTCAGATACTATCATGCTTATTTAGCTAAAGTTGATGAAAGAGTAGGCATACAAATTAGAGTTTTTGACACCGAACCCGGTCCATTTCAACATGTGTTGGATCAGATCTTAGCTTGTACTCTGAAGGAGAAAATTTTGCCTGATGTTAACCGCCAGCAGAATATTATTAGTTCATCAGGAATGGCAAAGTCAAAAGCTGTACTGATGACATCCTTAAGCTCTGGTTATTTTGAAAAGGTAAGAGACATGTATTGGGAATATCCTACGGTGACAGGNGAAGTAGTTGGCATTTACCAGCCAAGCCATGAAGGATATCAACAAACACAGAAGCAGATTCACAACCAAAAAGCTTGGGCAGAAATGTATCTANTAAGCTTAACTGATGTGTTGGTTACTAGCTCATGGTCTACTTTTGGGTACGTGGCTCAGGGGCTTGGAGGTTTAAAACCATGGATACTCTACAAACCTGAGAATCGAACAACCCCAGATCCTCCTTGTCAACGTGCCATGTCAATGGAGCCATGTTTCCATGCTCCTCCCTTCTATGACTGCAAGGCTAAGAGAGGAACTGACACTGGCGCACTTGTTCCACATGTCAGGCACTGTGAGGATATGAGTTGGGGCCTTAAGCTTGTAGACAATTAATTGTACTTAGCTAGCTATGACCCGTGCCAC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00596	28226	30568	+

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT37

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0042546 cell wall biogenesis

cellular_component
GO:0016020 membrane

molecular_function
GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000596s00021308.1	PF03254.8	XG_FTase	94	545	4.10E-234

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	14.676
SRR1783600	control	14.834
SRR1783602	moderate drought stress	9.573
SRR1811619	moderate drought stress	9.704

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.183
DRR006520	Root Summer glycyrrhizin high producing strain	8.073
DRR006521	Root Winter glycyrrhizin high producing strain	3.553
DRR006522	Root Winter glycyrrhizin high producing strain	3.512
DRR006523	Root Summer glycyrrhizin low producing strain	5.839
DRR006524	Root Summer glycyrrhizin low producing strain	6.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.492
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.638

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.636
SRR2868004	Drought Stress (root)	5.613
SRR2967015	Control (root)	5.843

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.127
SRR9715740	Leaf	0.973
SRR9715741	Leaf	0.556
SRR9715739	Root	6.228
SRR9715742	Root	6.497
SRR9715743	Root	5.978

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.868
SRR8749028	MeJA induced 9h	4.321
SRR8749029	MeJA induced 9h	2.653
SRR8749030	Uninduced	1.054
SRR8749031	Uninduced	0.382
SRR8749032	Uninduced	1.224

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.705
SRR8400027	Control - Root	8.285