Gene detail information of Glyur000596s00021300 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001049854.1 | 3.48E-29 | Os03g0300100 [Oryza sativa Japonica Group] |
| trEMBL | tr|Q0DSM0|Q0DSM0_ORYSJ | 1.00E-29 | Os03g0300100 protein {ECO:0000313|EMBL:BAF11768.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00596 | 3933 | 4379 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.003 |
| SRR1783600 | control | 7.358 |
| SRR1783602 | moderate drought stress | 5.803 |
| SRR1811619 | moderate drought stress | 5.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.866 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.615 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.201 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.810 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 72.450 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 68.855 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.279 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.013 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.018 |
| SRR9715740 | Leaf | 0.020 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.058 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.015 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 26.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.000 |