Gene detail information of Glyur000595s00018312 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67920.1 | 8.00E-06 | |
| NR | XP_007160423.1 | 4.38E-17 | hypothetical protein PHAVU_002G320600g [Phaseolus vulgaris] |
| trEMBL | tr|V7CQD7|V7CQD7_PHAVU | 2.00E-17 | Uncharacterized protein {ECO:0000313|EMBL:ESW32417.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00595 | 108177 | 108553 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.903 |
| SRR1783600 | control | 2.918 |
| SRR1783602 | moderate drought stress | 4.405 |
| SRR1811619 | moderate drought stress | 4.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.148 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.478 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 402.725 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 385.276 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.779 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.249 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.410 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 45.782 |
| SRR2868004 | Drought Stress (root) | 73.421 |
| SRR2967015 | Control (root) | 91.709 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.666 |
| SRR9715740 | Leaf | 13.289 |
| SRR9715741 | Leaf | 30.649 |
| SRR9715739 | Root | 6.422 |
| SRR9715742 | Root | 20.807 |
| SRR9715743 | Root | 15.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.489 |
| SRR8749028 | MeJA induced 9h | 38.762 |
| SRR8749029 | MeJA induced 9h | 30.991 |
| SRR8749030 | Uninduced | 12.327 |
| SRR8749031 | Uninduced | 50.890 |
| SRR8749032 | Uninduced | 21.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.848 |
| SRR8400027 | Control - Root | 11.804 |