Gene detail

Gene detail information of Glyur000595s00018301

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G24764.1	microtubule-associated proteins 70-2
NR	XP_003532520.1	PREDICTED: microtubule-associated protein 70-2-like [Glycine max]
Swissprot	tr\|Q8L7S4\|MP702_ARATH	Microtubule-associated protein 70-2
trEMBL	tr\|I1KQC0\|I1KQC0_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G05100.1}

Sequence

Transcript Sequence

>Glyur000595s00018301.1
GCATTACACTACCCGGTTTGTCTTAAGCCCATGTTAGATTGATTAGCGTGTTGAGTAAGAGTTTACTGTCTTTCTCTGTCACACAGTATTTGTCTGCTTAAACAGCTAGCCATACACTGATTACTGAGATTTGTTTAATCTCACACTCACTCTCACTCTAACACCAGACACACACAGAAAAAGAGAGAGAATAGAAAAGCCAGGTTTTAAAATCAGAGTCTAGAGAGAGAAACGAGCATANACTATGAAACAATCTATCTCCGGGTTTCTCTCTCTAAAACCACCGTCTCGTACTTCTCAGAGCTGCATTCTCTCTCTNTCTGTGTGCGTTGGGATCCTAGGAGGTAGGAGCATTTGGATGTAAGGGCGAGTGAGTGGTTTCGGCATCGGTTTTAGATCGGCCATGGCGGAGTTTTCGGGCGACGGAGGAGCGGAGGCGACTCCGGCGCCGTTGGCGGTGTCTGGATCGTTCAAGGAAGGGAGGAGCTCGTCGCGGAGGCGTGCTGCGGCGCCGCATTCGATGAGGCCGAGTCTTGACGCGGACGAGTTCATGAACCTGTTGCACGGTTCGGATCCGGTGAAGTTGGAGCTCAATCGACTGGAGAATGAAGTTAGAGATAAGGACAGAGAGTTATCGGAAGCACAGGCGGAGATCAAAGCCTTGAGGCATTCTGAACGACTCAGAGAAAAGGCTGTTGAAGAGCTTACCGAAGAATTGTCAAGGGTTGATGGGAAGCTGAAGTTAACAGAATCTCTTCTAGAAAGCAAAAATCTTGAAATCAAGAAAATCAATGATGAAAAGAAAGCATCAATGGCAGCTCAGTTTGCAGCTGAAGCTACTCTTCGAAGGGTCCATGCTGCTCAGAAGGATGATGACATGCCTCCTATAGAAGCCATTCTCGCCCCTCTAGAGGCTGAACTCAAGCTTGCTCGGCAAGAGATTGCTAAACTTCAAGATGATAACAAAGCTTTAGATCGTCTTACCAAATCTAAAGAAGCAGCACTTATTGAAGCTGAGAGGACTGTTCAGGTTGCCTTGGCTAAGGCCTCCATGGTGGATGATCTCCAAAATAAAAATCAAGAGCTAGTTAAACAGATTGAGATTTGCCAGGAAGAAAACAAAATTTTGGACAAAATGCATCGACTGAAGGTGGCAGAGGTTGAAAAACTCACCCAAACTGTGAGGGAACTAGAAGAGGCTGTCCTTGCAGGAGGCGCAGCTGCAAATGCTGTGAGAGATTATCAGCGGAAAGTTCAAGAAATGAATGAAGAAAGAAAAACTCTCGATCGGGAGTTGGCTCGTGCCAAAGTAACAGCAAACAGAGTAGCTGTAGTTGTGGCAAATGAATGGAAAGATGCTAATGACAAAGTGATGCCTGTTAAACAATGGCTTGAAGATCGACGATTCTTGCAGGGAGAGATGCAGCAACTTCGGGAAAAGCTTGCTATAGCTGAGCGTGCTGCAAAGTCTGAAGCTCAGTTAAAAGAAAAATATCAATTACGGCTTAAAGTGCTACAAGAGAGTTTGAGAGAAACTTCTAACAGTATTAATCGCGGCACCTCAGAGGGAAGATGTGTTAGCAATGGGCCTTCTCGACGTCAATCCCTAGGTGGAGCTGATAACCTATCCAAACTAACCTCTAATAATGGGTTTCTACCNAAGAGAACATCATCCTTTCAAATGAGGTCCTCTGTGTCCTCCAGCACAGTTTTGAAGCATGCTAAAGGCACATCTAAATCTTTTGATGGTGGCTCTAGGTCACTTGAAAGGAGTAAAATTCTTCTAAATGGAAAGCCTCCAAGTTCCTCATTTAACCAGTCTTCTGAAGGAACCAAAGACAGAGAGGAAAAAAATAATTGGAAAGGGAATTCGGATGATAAGCCAAATGACTTCCCAATGGTGGATACGGAGGATAGTGTTCCAGGAGTTTTGTATGATTTTCTACAGAAAGAGGTCTTAGCCTTGAGGAAAGCTGGTCAGGAAAAAGATCAAAGCCTAAAAGATAAAGATGATGCCATTGAGATGCTAGCAAAGAAAGTGGATACATTGACCAAAGCCATGGAAATTGAGGCAAAGAAAATGAGAAGGGAAGTAGCTACCATGGAGAAGGAGGTAGCTGCAATACGTATGGAGAAAGAACAGGAGACCAGAGCAAAGCGTTTCAGCAATGTAAAGGGCCCTATGAACAGTGCTCAGCATCAGCTTGTCTCTGGGAGAAATGTGGCACGGGGAGGATTAACACGCAGCACCCAATGACAATAAGTCTATTGCAGAGGCTCTAAGGAGTGAACTTTTATTCATAGCGTAATTATTCTGCCCTTCTCTGTTTATTTTTATTTTACTTTTGTCGTTTTTCCCCCAATTGATTATTAAGATTGTAACTGGCGTTCGAAATGATATTGGCCATGGATTGAGGGTAAGAAAAGAATTCAAGGAATCGGTATGCATCTGACCTAGACTGTCGTGTTCTCTGCTTAGAGAGATTGACTAAGAAGCCAGGCAAAGGAAGACGATTAACCCGGAGCTAACTTTCAGCTTTTCTTTGAGTGGCTGTGTGGGTGTATAGGTAGCTTTATCCCTTATTTTATCCTTTTGGCAGTTGATATTTGTAATACGCAGATAGTGTGATTGTGTTGGTTCGGCTTTGTTAATATCTTTGTAATCAGATCAAGAACTAAGCTTATTTGGTTGTGTAATACATTCATAGATTCAAGTTGAGATTGTAAGTTCATGTTTGACTGAACACGAAGTGCTGCTGTTTCATTTATTTCTCCATTGTTAAACTTTTAGTTAAGGGTAGTATATGCGTAACTGTTGTACCTCCGCCTCTTGC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00595	50091	55438	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007010 cytoskeleton organization

molecular_function
GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000595s00018301.1	PF07058.6	Myosin_HC-like	217	570	3.30E-175

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	62.688
SRR1783600	control	62.953
SRR1783602	moderate drought stress	55.811
SRR1811619	moderate drought stress	55.543

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	58.649
DRR006520	Root Summer glycyrrhizin high producing strain	57.794
DRR006521	Root Winter glycyrrhizin high producing strain	38.182
DRR006522	Root Winter glycyrrhizin high producing strain	36.914
DRR006523	Root Summer glycyrrhizin low producing strain	104.315
DRR006524	Root Summer glycyrrhizin low producing strain	104.112
DRR006525	Leaf Summer glycyrrhizin high producing strain	32.665
DRR006526	Leaf Summer glycyrrhizin high producing strain	32.250

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	93.936
SRR2868004	Drought Stress (root)	71.715
SRR2967015	Control (root)	69.144

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	64.591
SRR9715740	Leaf	49.480
SRR9715741	Leaf	41.744
SRR9715739	Root	17.249
SRR9715742	Root	81.068
SRR9715743	Root	70.443

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	145.206
SRR8749028	MeJA induced 9h	173.801
SRR8749029	MeJA induced 9h	210.990
SRR8749030	Uninduced	93.126
SRR8749031	Uninduced	28.038
SRR8749032	Uninduced	55.589

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	90.121
SRR8400027	Control - Root	103.047