Gene detail information of Glyur000595s00018293 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14780.1 | 0 | MAC/Perforin domain-containing protein |
| NR | XP_006580428.1 | 0 | PREDICTED: MACPF domain-containing protein At1g14780-like [Glycine max] |
| Swissprot | tr|Q8L612|MACP1_ARATH | 0 | MACPF domain-containing protein At1g14780 |
| trEMBL | tr|K7KRH8|K7KRH8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G34480.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00595 | 1546 | 8830 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000595s00018293.1 | PF01823.14 | MACPF | 83 | 292 | 1.40E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.364 |
| SRR1783600 | control | 2.329 |
| SRR1783602 | moderate drought stress | 3.227 |
| SRR1811619 | moderate drought stress | 3.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.890 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.932 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.617 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.830 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.034 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.901 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.846 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.868 |
| SRR2868004 | Drought Stress (root) | 18.463 |
| SRR2967015 | Control (root) | 12.685 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.149 |
| SRR9715740 | Leaf | 18.704 |
| SRR9715741 | Leaf | 23.186 |
| SRR9715739 | Root | 2.284 |
| SRR9715742 | Root | 5.264 |
| SRR9715743 | Root | 3.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 37.302 |
| SRR8749028 | MeJA induced 9h | 55.635 |
| SRR8749029 | MeJA induced 9h | 34.226 |
| SRR8749030 | Uninduced | 40.026 |
| SRR8749031 | Uninduced | 30.479 |
| SRR8749032 | Uninduced | 16.740 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.076 |
| SRR8400027 | Control - Root | 6.250 |