Gene detail

Gene detail information of Glyur000594s00025972

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G54830.1	DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein
NR	XP_004485991.1	PREDICTED: uncharacterized protein LOC101505254 [Cicer arietinum]
Swissprot	tr\|Q9FFU6\|B561A_ARATH	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830 (Precursor)
trEMBL	tr\|G7IP50\|G7IP50_MEDTR	Dopamine beta-monooxygenase, putative {ECO:0000313\|EMBL:AES64135.2}

Sequence

Transcript Sequence

>Glyur000594s00025972.1
ATGCTTCGCGAAACCATCTTGATCTTCCTATTGTCCTTGTCGTCCTTCGGGTATGCGGTGGATCCTGCTGCTCCGAAATGCACCCGGAGNAGCCCCTCCGTCGATTTGGAATCGGAGTTCAAAATGGTTCAGCACCAACTCAGAGGCCACCTCAGAATCGTCGACGATTGCTCCTTTAGGGTTTCCCAATTCGACATGCTCCCTGGCTCCGACGTGCATTGGTGGGGTGCACTCGCTCCCGATTTCGATAACCTCACCACCGGATTCATCGTCTCCGACCACAAGCTCAACCAAACCTACGCAAACTCCACCTTCGTCGTTCGCTTGTTGCCCAACGTCACGTGGAAAATGATCCGCGTCCTCGCCGTGTGGGACCTTCCCACCGCCTCCGATTTCGGCCACGTCGTGCTNCGAAACCTCACCGACGCGGCGGCGCCGTCGCCGTCGCCCCGGGAAGAGAATAAGGAGGACGGTGATGTTCACAGGGAGCCAACTATGTTCGACAATTGTAAGGTTCTGTCGAAGGACTTGAGGGTTCGGTGGAGTTTGAATTCGGAGGAGGATTCCATTGAGATTGGGTTGGAGGGTGCAACTGGGGTGATGAACTATATGGCTTTTGGTTGGGCAAGCCCTAATGCCACTGATTCCGAGCTCATGGTTGGTTCTGACGTGGCTGTTGCTGGGTTTAAGGCAGACGGTTTGCCCTTTGTGGATGATTTTTTCATCACCAAGAATAGTGAGTGTGTGAAGAACAGTGAGGATGGATCTGCTGAAGGGGTTTGTCCCGATTCAATATATGTAGGGCCAGAAAGGATTGGTTTGGTGAATGATACGAGGTTGATATATGGGCATAGGAGAGATGGGGTTTCATTTGTTAGGTACAAGAGGCCATTGAGTCAGGTTGATGGCAAGTATGATCAACCTGTGGATCGATTGGCTAACATGACTGTGATTTGGGCCCTAGGTAAGATTAGGCCTCCTGATGCTGTTCAGCCTTACTATCTTCCCCAGAATCATGGGGGTCTTCCGTTTGAGACTTTTGGACACTTGGTTCTGAATGTTTCCCAGCATGTCAATGATTGTAAAGGTCCCTTGGATGCTCCAGATAAGGAGGATCAAGATGTCATCACTGCTGATGCTAAGGTTCCCTTGGTTGTTTCCTCTGGTCCGGCTTTGCATTACCCCAACCCTCCGAATCCGGCCAAGGTTCTTTACATCAACAAAAAGGAGGCTCCTGTGTTGAGAGTGGAAAGAGGGGTGCCAGTCACGTTTTCCATACAGGCCGGCCACGATGTCGCNCTCTATGTTACCTCGGATCCCATTGGTGGAAACACTACGCTGAGGAACCTGACGGAGACTATTTATGCCGGAGGTCCTGAGGCTCACGGAGTTCAGGCAAGTCCCAAGGAACTGATTTGGGCTCCTGACAGGAACACTCCTGATCACATCTACTATCACTCGTTGTATGAGAAGAAAATGGGTTGGAGAGTGGAGGTTGTGGATGGGGGTCTATCTGACATGTATAATAACAGTGTTGTTCTGGATGATCAACAGGTTACCTTCTTTTGGACACTGTCAAAGGATTCCATATCTATTGCTGCTCGTGGTGAGAAAAAGAGTGGCTATCTTGCCATAGGATTTGGAAGTGGGATGATATACAGTTATGCTTATGTGGGCTGGATTGATGACAATGGTGTAGGTCGTGTGAACACTTACTGGATTGATGGAAGGGATGCTTCAGGCATACATCTCACGCATGAAAATTTGACATATGTGAGGTGCAAATCTGAAAATGGCATCATTACCTTGGAGTTTACACGTCCCTTGGTTCCATCTTGTGGTAGGGGCAAGAGGCCAGAATGTAACAATATTATTGATCCCACAACTCCACTTAAAGTTGTATGGGCTATGGGTGCTAGATGGAGTAATGACCATCTCAGCGATAGGAATATGCATTCTCTTACGAGTAGTAGGCCTATACGTGTACAGCTGATGCGCGGTTCTGCAGAAGCAGAGCAGGATTTACTTCCTGTTTTGGCTGTGCATGGCTTCATGATGTTTCTAGCATGGGGTATCTTGCTTCCTGGGGGTACAATGGCAGCCAGATACTTGAAACATTTGAAGGGTGATGGTTGGTACAAAATTCATGTTTACTTGCAATACTCAGGGTTAGCAATAGTTCTTCTTGCCCTTCTTTTCGCTGTTGCCGAGCTTCGGGGATTTCATGTCAGCTCAACACATGTTAAATTTGGAATTGCTGCAATATTTTTGGCTTGTATGCANCCAGTGAATGCTTTCCTTAGGCCCCAAAAACAGTCAAATGGGGAGCAGGCACCCTCTAAAAGGGTTATCTGGGAATACTTGCACATAGTTGTGGGCAGATCTGCCATTGTTGTTGGCATTGCAGCACTTTTTAGTGGCATGAAGCATTTGGGAGACAGATATGCCTTGGAAAACGTCCATGGACTCAACTGGGCAATGGTGACTTGGTTCCTATTTGGTGCATTGACTATTGCTTATTTGGAATACCGCGAGAAGCAGCGAATAAGGGACCGGATTTTTGGAAGAGGCAACTGGGTGCTTGGTAATATTGAGGAAGATGATTCCCTTGATCTCTTGAGCCCAACCAGTACACATGCAGACAAAGAGTCACAAGCTTCTGTAAGAATGGAAGTCCAGTTAGAACCTTTAAACAGATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00594	123797	126496	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0017004 cytochrome complex assembly

molecular_function
GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000594s00025972.1	PF10517.4	DM13	40	138	1.70E-11
Glyur000594s00025972.1	PF03351.12	DOMON	174	322	2.70E-13
Glyur000594s00025972.1	PF03351.12	DOMON	515	638	7.00E-27
Glyur000594s00025972.1	PF01578.15	Cytochrom_C_asm	679	842	2.90E-05

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.609
SRR1783600	control	8.075
SRR1783602	moderate drought stress	8.141
SRR1811619	moderate drought stress	7.835

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	16.470
DRR006520	Root Summer glycyrrhizin high producing strain	16.390
DRR006521	Root Winter glycyrrhizin high producing strain	6.720
DRR006522	Root Winter glycyrrhizin high producing strain	6.381
DRR006523	Root Summer glycyrrhizin low producing strain	34.068
DRR006524	Root Summer glycyrrhizin low producing strain	33.500
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.703
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.618

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	14.722
SRR2868004	Drought Stress (root)	19.765
SRR2967015	Control (root)	25.347

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	19.846
SRR9715740	Leaf	15.391
SRR9715741	Leaf	21.271
SRR9715739	Root	17.802
SRR9715742	Root	42.783
SRR9715743	Root	41.466

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	30.398
SRR8749028	MeJA induced 9h	28.867
SRR8749029	MeJA induced 9h	23.114
SRR8749030	Uninduced	35.794
SRR8749031	Uninduced	19.740
SRR8749032	Uninduced	19.619

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.440
SRR8400027	Control - Root	13.478