Gene detail information of Glyur000593s00016426 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006603932.1 | 2.97E-19 | PREDICTED: uncharacterized protein LOC102667056 isoform X2 [Glycine max] |
| trEMBL | tr|V7D0K6|V7D0K6_PHAVU | 1.00E-10 | Uncharacterized protein {ECO:0000313|EMBL:ESW35909.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00593 | 46246 | 48839 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000593s00016426.1 | PF03004.9 | Transposase_24 | 55 | 140 | 3.60E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.939 |
| SRR1783600 | control | 13.899 |
| SRR1783602 | moderate drought stress | 5.197 |
| SRR1811619 | moderate drought stress | 6.129 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.913 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.633 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.454 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.466 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.059 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.099 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.002 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.059 |
| SRR2868004 | Drought Stress (root) | 0.033 |
| SRR2967015 | Control (root) | 0.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.675 |
| SRR9715740 | Leaf | 4.057 |
| SRR9715741 | Leaf | 14.554 |
| SRR9715739 | Root | 0.207 |
| SRR9715742 | Root | 2.950 |
| SRR9715743 | Root | 1.660 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.021 |
| SRR8749028 | MeJA induced 9h | 0.083 |
| SRR8749029 | MeJA induced 9h | 0.020 |
| SRR8749030 | Uninduced | 0.021 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.758 |
| SRR8400027 | Control - Root | 9.244 |