Gene detail

Gene detail information of Glyur000591s00018662

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT4G33200.1	myosin, putative
NR	XP_004498862.1	PREDICTED: myosin-J heavy chain-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q0WPU1\|MYO15_ARATH	Myosin-15
trEMBL	tr\|K7M5Y2\|K7M5Y2_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G11170.2}

Sequence

Transcript Sequence

>Glyur000591s00018662.1
ATGAAGCTAACCCGAAAGAAAAAAAATGCGACAAGCCGAAAACCGAACTCACTGGGTGAGTTGACCAAAAAAAAGGTGACGTGTCGTATCGACAACGGGCGGGAACCCATAACTCCACCTATCTATCTCCTTCCCTTCTCTCTCTCCCTCTCCCTCTCCGTGTGTGTGTGTCTATCAGTTATCTCTTTTAGGGTTTCAATTTCAAACTTCATTTCGCAATTTGCAGCGACCATGAAGAGTTTGCGCAAGGGCTCTAAGGTTTGGGTCCAACACAGGGAATTGGCTTGGGTTGCTGCTGAAGTGCTCGATTGTGATGGCAACCGTGTCCAGCTCGTAACTGATTCCGGCAACAAGGTTTTTGCTTCGCCGGAGAAACTGTGTCGGAGGGATGCGGATGAAGAGGAGCTTGGGGGATTCGAAGATATGACCAGGTTGACTTACTTGAATGAACCGGGAGTGTTGTACAATCTTCGCAGAAGATACGCGCTCAATGATATCTATACATATACAGGGAGCATTTTAATAGCTGTTAATCCATTCACAAAGCTTCCTCATTTGTATGATATCCATATGATGGAGCAGTATAGGGGAGCTCCTTTGGGTGAGCTTAGCCCACATGTTTTTGCTGTCGCTGATGCATCTTATCGAGCAATGATGAATGAAGGTAAAAGTCAATCTATTTTGGTAAGTGGTGAAAGTGGCGCCGGAAAAACTGAGACCACAAAATTGATCATGCAATATCTTACCTTTGTTGGTGGACGTGCTGATGGNGGTGATAGAACGGTTGAACAACAAGTTCTTGAATCGAATCCACTTTTGGAGGCATTTGGCAATGCAAGGACTGTTAGGAATGACAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATACAAATGGTAGAATATCTGGTGCTGCAATTAGAACTTACTTATTGGAAAGATCACGAGTTGTGCAGATAACGGATCCAGAAAGAAATTACCACTGCTTCTATCAATTGTGTGCATTTGAAAGGGATGCAGAGAAGTATAAGTTAGGACATCCAAGTCACTTCCANTATTTAAATCAAAGTAAAATCTATGAACTAGATGGTGTTAGCAATGCTGAAGAATACTTGAAAACAAGGAGGGCAATGGATATTGTTGGCATCAGTCATGAGGATCAGGAAGCCATATTTCGTGTCTTAGCTGCAATTTTACACTTGGGAAACATTGAATTTTCTCCTGGAAGAGAGCATGACTCATCAGTTATAAAGGATGAAAAATCAAGATTTCATATGCAGATGGCGGCTAATCTTTTCATGTGTGATGTCAACATACTGCTGGCAACGCTGTGTACTCGTTCAATACAAACTCGAGAAGGAAGTATTGTCAAGGCCCTTGATTGCAATGCTGCTGTTGCTGGACGTGATGCTTTGGCAAAAACTGTTTATGCTCGTTTATTTGATTGGCTTGTTGATAAGATCAATAGGTCTGTCGGGCAAGATATCAATTCCCACATGCAAATCGGCGTTTTGGATATTTATGGTTTTGAGTGCTTTAAGGATAATAGTTTCGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAGGAGGAGTATTGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTGTGGACAACCAAGATGTTCTAGATTTGATTGAAAAGAAACCCATTGGTATCATTGGTCTCATGTTTCCAAAATCAACACATGAAACATTCTCAACCAAATTGTTTCAGCATTTCCGGTCTCACCCGAGGTTGGAAAAGGAAAAGTTTTCACAAACAGATTTTACCATTTCTCATTATGCTGGGAAGGTCACTTATCATACAGATACCTTTTTAGACAAAAACCGTGATTATGTTGTTGTAGAACACTGTAATCTATTATCTTCTTCAAAATGCCCGTTTGTGTCTGGTCTTTTCCCTTTGCTACCTGAGGAATCTTCAAGATCATCGTACAAGTTTTCTTCAGTAGCTACCAGATTCAAGCAACAACTTCAAGCACTCATGGAGACTCTCAACTTAACAGAGCCTCATTACATACGATGTGTGAAGCCAAATTCTTTGAATCGACCACAAATATTTGAGAATGCAAGCATCATACACCAATTACGCTGNGGGGGTGTCCTTGAAGCTGTTCGGATAAGTCTGGCAGGTTACCCCACTCGAAGAACTTACTCAGAGTTTGTAGATCGTTATGGATTAATAGCCCCCAAATTTATGGATGGAAGTTGTGATGATAAAGCTGCAACTGAGAAAATTTTGCATGAGCTCAAGCTTGAGAATTTTCAGTTGGGCAGGACCAAAGTATTTCTCAGGGCTGGTCAAATTGGCATTTTGGACTCCAGACGTGCTGAGGTTTTGGACAATGCTGCAAAGTGTATTCAGCGCCGACTGAGGACATTTATTACACGCAGGGATTTCATCTCAGTCAGAGCTGCTGCAATGTATACAGCTAAAAGGGAGACAGCAGCGGCTATCTCCATTCAAAAGTATATTCGTATGTGGCTAATGAGGCATGCATACTTGAAACTATATTCTTCTGCTATCATCATACAGTCCCATGTTCAAGGTTTCATGACTCGCCAAAAATACTTGCATGAAAAAGAACATAGAGCTGCTACTTCTATTCAGGCCTGTTGGAGGATGTACAAGGTTAGGTCAGCTTTCCAGCGACATCTAGCTTCAATTGTGGCAATACAATGCCTTTGGCGGTGTAGACTAGCAAAAAGGGAGCTTCGTAGACTTAAACAAGAGGCTAATGAAGCTGGTGCCCTCCGATTAGCTAAGAATAAACTTGAGAAGCAATTGGAAGAGCTCACATGGCGTTTGCATCTAGAAAAGAAAATAAGGGTTTCTAATGAAGAGAGCAAGCAGATAGAGGTTTCTAAACTTAGAAAAATGTTAGAAGCTCTGAATCTTGAATTAGATGCAGCTAAACTGGCTACAATTAATGAGTGCAACAAGAATGCAGTTCTGCAAAATCAATTGGAATTGTCAGNTAAGGAAAAATCTGCTCTAAAAAGAGAGCTAGTTGGTGTGGATGAATTACGAAAGGAAAATGCTATGTTAAAGGTTTCATTGGATGCCTTTGAGAAGAAGTATGCATCTTTAGAGCTTGATCTTATAAATGCTCAAAAAGGCCATGGTGAAACCATCGAGAAACTGAGGGAATTTGAACAGAAGTGCTCTCAACTCGAGCAAAATGTGAAAAGCCTTGAGGAAAAGCTATTGAGTTTAGAGGATGAAAATCACGTGCTTCGTCAGAAAGCCGTAAGTGCTCCTCCTAAGAGTAACCGTTCAAGTTTTGCAAAGTCATTTTCAGCAAAATACTCAAGTGCAGTAGCCTCCCGCACTGAGCGAAAGCCCATATTTGAGTCACCCACGCCCACAAAACTTATTGGCTCGTTTACGCTAGGCTATTCAGACTCTCATCGATCCAAGTTAACAGCAGAGAGGCACCAGGACAACTATGAATTCCTCTCTAGNTGTATCAAAGAAAATTTGGGATTCAAAAATGGTAAACCTCTTGCAGCTCGTATCATATACAAATGTCTTCTTCATTGGCATGCCTTTGAATCTGAGCGTACAGCCATTTTTGATTACATAATTGAAGGCATAAATGAGGTTCTAAAGGTTAGGGATGATGACATTGTCTTGCCGTATTGGCTGTCGAATACCTCTGCGCTTCTGTGCCTCTTACAGAGGAACTTGCGTTCAAATGGATTTTTAACTACCACTGCTCATCGTCATACTGCATCATCTGGCTTGACCAGCAGGACTGTGCATGGACAAAAATCTCCTTTAAAGTTTATTGGATATGATGATGGTATGTCTCATGTGGAGGCGAGATATCCAGCTATACTTTTCAAGCAACAACTAACTGCCTGTGTTGAGAAAATTTTTGGCCTTCTACGTGATAATTTGAAGAAGGAACTTTCTCCACTTTTGGGATTATGTATTCAGACACCCAAAACAGGAAGAGTGCATGGTGGAAAATCATCTAGATCTCCTGGTGGGCCTCCTCAACAATCATCTGGTGGTCAGTGGGGCAACATTGTCAAATTTTTGGATTCGNTCATGAGCAAACTTTGTGGAAATCATGTGCCACCCTTCTTCATCCGTAAGCTAGTTACCCAAGTTTTTTCCTTCGTCAATATTACACTCTTCAACAGTCTTCTTTTACGTCGTGAATGTTGCACATTCTCCAATGGTGAATACATGAAGTCTGGTCTTGCAGAACTGGAGAAATGGATAGCCAATGCAAAGGAGGAGGTAATACATCAGAAGAGGAGGAAATCTTTGGAAGAGATTCGACAGGATCTTTGTCCGGCATTGACTGTCAGGCAAATCTACCGAATCAGTACTATGTACTGGGATGACAAGTATGGAACCCAGAGTGTGTCCAATGAGGCAATTAGTGAAATGAGGGAGATTGTTAGCAAGGACAATCAGAACCTGACCTCAAATTCTTTCTTATTGGATGATGATCTGAGTATCCCTTTCTCTGCCGAAGATATAGATATGGCAATTCCTGCTATAGATCCTGATGAGGTTGATCTCCCAGCTTTTGTGTCGGAATATTCTTGTGCACAGTTTCTTGATTCACAGCAG

Protein Sequence

>Glyur000591s00018662.1
MKLTRKKKNATSRKPNSLGELTKKKVTCRIDNGREPITPPIYLLPFSLSLSLSVCVCLSVISFRVSISNFISQFAATMKSLRKGSKVWVQHRELAWVAAEVLDCDGNRVQLVTDSGNKVFASPEKLCRRDADEEELGGFEDMTRLTYLNEPGVLYNLRRRYALNDIYTYTGSILIAVNPFTKLPHLYDIHMMEQYRGAPLGELSPHVFAVADASYRAMMNEGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRADGGDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCAFERDAEKYKLGHPSHFXYLNQSKIYELDGVSNAEEYLKTRRAMDIVGISHEDQEAIFRVLAAILHLGNIEFSPGREHDSSVIKDEKSRFHMQMAANLFMCDVNILLATLCTRSIQTREGSIVKALDCNAAVAGRDALAKTVYARLFDWLVDKINRSVGQDINSHMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYCKEEINWSYIEFVDNQDVLDLIEKKPIGIIGLMFPKSTHETFSTKLFQHFRSHPRLEKEKFSQTDFTISHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKCPFVSGLFPLLPEESSRSSYKFSSVATRFKQQLQALMETLNLTEPHYIRCVKPNSLNRPQIFENASIIHQLRXGGVLEAVRISLAGYPTRRTYSEFVDRYGLIAPKFMDGSCDDKAATEKILHELKLENFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQRRLRTFITRRDFISVRAAAMYTAKRETAAAISIQKYIRMWLMRHAYLKLYSSAIIIQSHVQGFMTRQKYLHEKEHRAATSIQACWRMYKVRSAFQRHLASIVAIQCLWRCRLAKRELRRLKQEANEAGALRLAKNKLEKQLEELTWRLHLEKKIRVSNEESKQIEVSKLRKMLEALNLELDAAKLATINECNKNAVLQNQLELSXKEKSALKRELVGVDELRKENAMLKVSLDAFEKKYASLELDLINAQKGHGETIEKLREFEQKCSQLEQNVKSLEEKLLSLEDENHVLRQKAVSAPPKSNRSSFAKSFSAKYSSAVASRTERKPIFESPTPTKLIGSFTLGYSDSHRSKLTAERHQDNYEFLSXCIKENLGFKNGKPLAARIIYKCLLHWHAFESERTAIFDYIIEGINEVLKVRDDDIVLPYWLSNTSALLCLLQRNLRSNGFLTTTAHRHTASSGLTSRTVHGQKSPLKFIGYDDGMSHVEARYPAILFKQQLTACVEKIFGLLRDNLKKELSPLLGLCIQTPKTGRVHGGKSSRSPGGPPQQSSGGQWGNIVKFLDSXMSKLCGNHVPPFFIRKLVTQVFSFVNITLFNSLLLRRECCTFSNGEYMKSGLAELEKWIANAKEEVIHQKRRKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEAISEMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAIPAIDPDEVDLPAFVSEYSCAQFLDSQQ

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00591	56676	76176	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0016459 myosin complex

molecular_function

GO:0003774 motor activity

GO:0005515 protein binding

GO:0005524 ATP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000591s00018662.1	PF00063.16	Myosin_head	140	790	3.40E-224
Glyur000591s00018662.1	PF00612.22	IQ	840	859	0.00051
Glyur000591s00018662.1	PF00612.22	IQ	865	882	0.0062
Glyur000591s00018662.1	PF00612.22	IQ	888	908	9.40E-05
Glyur000591s00018662.1	PF00612.22	IQ	912	931	0.057
Glyur000591s00018662.1	PF01843.14	DIL	1393	1457	3.20E-14
Glyur000591s00018662.1	PF01843.14	DIL	1444	1480	0.00014

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.725
SRR1783600	control	2.636
SRR1783602	moderate drought stress	3.264
SRR1811619	moderate drought stress	3.298

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.513
DRR006520	Root Summer glycyrrhizin high producing strain	2.631
DRR006521	Root Winter glycyrrhizin high producing strain	4.394
DRR006522	Root Winter glycyrrhizin high producing strain	4.086
DRR006523	Root Summer glycyrrhizin low producing strain	4.580
DRR006524	Root Summer glycyrrhizin low producing strain	4.532
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.159
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.074

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.560
SRR2868004	Drought Stress (root)	11.326
SRR2967015	Control (root)	12.656

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.953
SRR9715740	Leaf	7.123
SRR9715741	Leaf	7.819
SRR9715739	Root	0.553
SRR9715742	Root	3.411
SRR9715743	Root	3.389

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.312
SRR8749028	MeJA induced 9h	8.843
SRR8749029	MeJA induced 9h	2.940
SRR8749030	Uninduced	5.111
SRR8749031	Uninduced	8.115
SRR8749032	Uninduced	3.421

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.893
SRR8400027	Control - Root	8.687