Gene detail

Gene detail information of Glyur000590s00022559

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G38240.2	1.00E-109	alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
NR	XP_004500686.1	1.59E-158	PREDICTED: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q9XGM8\|MGAT1_ARATH	2.00E-135	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
trEMBL	tr\|I1K6U7\|I1K6U7_SOYBN	1.00E-156	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G00230.1}

Sequence

Transcript Sequence

>Glyur000590s00022559.1
GCATCTTACATAATATGCACTTTGTATTGTTAGTTTCATGTAAATACAAACATATTTAGTGGTTCGTCATGTCAAAAGTATGTTATGAACAATCTTAAAAGAAATTTTGGTCTATTGGATATCCGGGAATTTACCATTCCATAAATAAACATTTCAGGAAAAGACCTACGGAGGCTGATAGATAAAGTGCAGGTTCCAGTGGCAGCTGTTGTGATCATGGCATGTAATCGTGCTGATTACCTGGAGAGGACTATCAATTCTATACTGAAATACCAAAGGTCCATTTCTTCAAGATATCCTTTATTTGTATCTCAGGATGGATCAAATCCAGATGTTAAAAATAAGGCTTTGAGCTATGATCAGTTATCTTATATGCAGCACTTGGATTTTGAATCAGTTCAAACTGAAAGGCCAGGAGAGTTAATTGCTTACTACAAGATTGCACGTAAGAGTTTTCTTCATGCTTTTCCAATGTGTTTTGAGTTCTCTATTTGAGAAGAATATTCCACGAGAGGGGTCAATTGATACCTTTATCAGGTCATTACAAGTGGGCTCTAGATCAACTGTTCTACAAGCATAACTTCAGCCGAGTAATCATTCTTGAAGATGACATGGAAATAGCACGTGATTTCTTTGATTATTTTGAAGCTACAGCGACTCTCCTTGACAAGGATAAGTCCATTATGGCTGTTTCCTCATGGAATGACAATGGACAGAAGCAGTTTGTACANGATCCATATGAACTTTATCGCTCAGACTTCTTTCCTGGACTAGGATGGATGCTGGGTAGATCTACATGGGATGAACTATCGCCAAAATGGCCAAAAGCTTACTGGGATGACTGGTTGAGATTAAAAGAGAATCATAAAGGACGACAGTTTATCCGACCCGAAGTATGCAGAACATATAATTTTGGCGAGCATGGTTCTAGTTTGGGACAGTTTTTTAAGCAATATCTTGAGCCAATTAAGCTGAATGAGGTCCAGGTTGATTGGAAGTCAATGGATTTGAGCTATTTGTTGGAGGACAAATATGCTATGCACTTTGCCAATAATGTTAAGAAAGCTAAACCTGTCTCTGGAGCAGACGTCGTTCAAAAGGCATATAATATAGATGGCGATGTGCGTATAAAATATAAAGATCAGTCAGACTTTGAAAACATTGCTCAACAATTTGGTATATTTCAAGAGTGGAAGGATGGTGTGCCCAGGACAGCCTATAAAGGAGTGGTCGTTTTCAGATATCAAACCACAAGGCGCATATTCCTTGTTGGTCCAGAATCTTCGAAGCTACTTGACATTGAAGATTCTTGATGCTGGGTGAGGAAGAAAAGTATTCAAAACGTGGGAGAGTAGTCGTTTTCAGATGTCAACGGAAGTATTGCTGAGTAATTTATACTGAGCTTAAAATGACATTTGATNTGGATATCTGTCATTGTCTTGCCCAATGCTTAGAAGAGACTATGATGTGCGCTGAAAGTGTAAAGGTACATACGAGAATGTTCTGAAACACAATTACGGTCACCATCTCTTGTATCTTATAGGGATTGAAATTTTGTCTTCTGATGCGTGTGGTCTTAGAGTGACCTTGGGAATCATATATCATATAGTATATTATTTGATAGAATTGCAGTTTAGGGTCTGGTTGGTTTAAAAGAGGGGAGGAAATTAACTAGATACCTTGTTTGGTTGAGAGGAGGAGAGGGAAGAGATTTTAATGGTAGGAAAAGATTAACTTACATTTTATGCCTTTATAAAAAAAATTGTTATTTTTTAGATAAGATTATTTAAGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00590	53326	76040	+

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT13

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00726	MGAT1	EC:2.4.1.101	N-Glycan biosynthesis	map00510
			Various types of N-glycan biosynthesis	map00513

Gene Ontology

biological_process
GO:0006486 protein glycosylation

molecular_function
GO:0008375 acetylglucosaminyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000590s00022559.1	PF03071.10	GNT-I	1	231	4.40E-124

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.467
SRR1783600	control	6.605
SRR1783602	moderate drought stress	11.021
SRR1811619	moderate drought stress	11.053

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	21.006
DRR006520	Root Summer glycyrrhizin high producing strain	20.792
DRR006521	Root Winter glycyrrhizin high producing strain	21.686
DRR006522	Root Winter glycyrrhizin high producing strain	20.860
DRR006523	Root Summer glycyrrhizin low producing strain	21.326
DRR006524	Root Summer glycyrrhizin low producing strain	20.710
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.216
DRR006526	Leaf Summer glycyrrhizin high producing strain	12.737

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	28.541
SRR2868004	Drought Stress (root)	28.771
SRR2967015	Control (root)	27.170

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	24.690
SRR9715740	Leaf	23.894
SRR9715741	Leaf	28.135
SRR9715739	Root	1.909
SRR9715742	Root	8.673
SRR9715743	Root	8.293

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	35.892
SRR8749028	MeJA induced 9h	31.589
SRR8749029	MeJA induced 9h	37.474
SRR8749030	Uninduced	42.396
SRR8749031	Uninduced	41.582
SRR8749032	Uninduced	31.806

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	27.191
SRR8400027	Control - Root	27.332