Gene detail

Gene detail information of Glyur000590s00022556.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G19300.1	3.00E-176	Protein kinase superfamily protein
NR	XP_004505235.1	0	PREDICTED: probable receptor-like protein kinase At1g49730-like [Cicer arietinum]
COG	YP_007098221.1	1.00E-11	serine/threonine protein kinase [Chamaesiphon minutus PCC 6605]
Swissprot	tr\|Q9FX99\|Y1497_ARATH	0	Probable receptor-like protein kinase At1g49730 (Precursor)
trEMBL	tr\|I1KM10\|I1KM10_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G33690.1}

Sequence

Transcript Sequence

>Glyur000590s00022556.1
TGGAGGGGAACCTCTGGCCCCTGGAATCTGAAACAAATTAAGGGGTGCCCCACGAAGGCATTGAAAAAATTGATGTTCTTCTTCATCAGTGCGCATTTATTATTAGACTCCAAACAAGAGTACAAAACCCTCTCCCTCTCTCTCGCACACACACTCACAAGACCCACACCCACACCCACACCCACACCCACACGCCCCATACACAGTCTCTCTGAAAAGTCTCAAACCTATTGCAACACCCAATACTAGTGAATGGTGTTCTCAAAATGGGCTGAGTAGTACCCTCGTCTTGTACCTTCACGGGTGCCCTTAAAATTCTTTACTGTGTGCTCTCAAAACTTTCATCTTTTCCAGCTCCATCATGCTCTACGGACCTGCTTCCTTGTTGGGATTGTTGGCTTTTCTTGGAATGCAGCTCCCTGTCGTAATAGCTGATTGCCCTTTGGATTTTACTGCATCAAACTTTACACTGGCATCCTCTCTATGCTCTAACCAAGGTGACAGAGGAAAATGTTGCCGCTACATCAATGCTAATATTGCAATTTCTGTTGCTCGGTTTGCTAATGCTACAAGCACCCTAGGGGTCCCTCTGAATACCTCTGATATCTGCCTCCAAACCATATTTCAGACCTTGCAACTTTATGGAGTTTCACAAAATGCAACAGTTTTCTGTGGATTTGGGACAAAAATTCCTGTTAATTACGATTGCAAGGGCCGGAGTAGTGTTATGCAAATGCTGCAATCTCCCAGATTTGTGGAGGTCACAAAAAATTGCAAAGCACCACTTGGAAAGGAAAGTAAATGTAAGAAGTGCTTAAACGCCGGCTTTGGTTATCTGCATCATTTAGGAATTGAAGATAATATAACACTAAGTACATGTCGTGATGCCACTTTTGCTGCACTAGCAAGCCAAGTTGATGAGATATCCACCATTGACATTGCAAGTTGTTTCTTTGGGGTTCAAGGACTTCTCGAGCCTCCTGCTTCAGAGTCATCCCCATCCTTGCCTGCTCCTGAAGCTTCTCCAAGTCCACTGGTTNCTGCTGATAGCCCAAGTCAACTATTGTTAGGTGTACCTTCTAAAGGAAACCACCATTCATATCACTTGACTTTAGTTCCATGTATTGCTATTGCAGTTACAGCTGTTGCTATTATGACGCTCATAGTCTTGATAGTTCTAATTCGCCAAAAAAGCAGAGAGCTTGATGAGCCTGATAATTTTAGTAAAACCAATTCGAAAACCTTACCTCCTTGTGCAATATGGAAATTTCAGGAAGGTTCTTCATCTATGTTCCGAAAATTCAACTACAAAGAGATAAAAAAGGCAACAGAGGGGTTTAGCACCATCATTGGCCAAGGGGGATTTGGAACTGTATATAAAGCTCATTTTAGTGATGGCCTGGTTGCAGCAGTAAAACGGATGGACAGAGTCTCAGAACAGGGGGAGGATGATTTTTGCAGAGAAATTGAGCTTCTTGCCCGGCTGCACCATCGGCATCTTGTTGCATTAAGAGGCTTTTGCATCAATAAACGGGAGAGGTTTCTGTTGTATGAGTACATGGGAAATGGAAGCTTAAAAGATCATCTTCATTCCCCTGGTAAAACACCTTTAAGTTGGCGAACTAGAATCCAAATTTCCATTGACGTGGCTAATGCACTGGTAATTTCTCTGATTATGATTAATTGGAGTACCTTCATTTCTATTGTGATCCTCCTCTGTGTCACAGAGATATTAAGTCTAGCAACACTTTACTCGACGAGAACTTTGTTGCTAAGGTTGGATGATTCTCTGACCGCATGCCACCACTTCTACTGTTATATAGCTGATTTTGGCCTTGCACAAGCTTCAAAAGATGGTTCAATATGCTTTGAACCTGTAAACACTGAAATCTGGGGAACTCCAGGTTATATGGATCCGGAATATGTTGTTACTCAAGAGCTCACTCAGAAAAGTGATATATACAGTTTTGGGGTGTTACTACTGGAAATTGTGACAGGAAGACGCGCCATTCAAGATAATAAGAATTTGGTAGAATGGGCACAACCATACATGGAATCAGAAACGAGATTNTTAGAGCTAGTAGATCCCAATGTGAGGGAGTCTTTTGACTTGGATCAGCTTCATACGGTAATCTCTATAGTAGGATGGTGCACCCAGAGAGAAGGAAGGGCAAGACCTTCAATAAAACAGGTCCTTAGGCTTCTGTATGAGACGTCGGAACCGATGGACAGCGAGTTTCTACAAGCTGTTGAAGATGAAGAATGTCAGGGAAGTCAGCATAGAGGCAGAAGAAGCAAAGGGAAAATGCTCAGAAACGAAGGAAATTTTCACAGCGGGGATGGAAGATATCTTGCTTCATCTTCGAGTACATCTCGGTCATATTGCAGTAGAAGCTTTTTGCTTGAGAATGGCTCTCCGCAGTCCCCACCAAATATATTCTCAATATGAAACAATCATTAGGTTCTTCTTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00590	39798	44578	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.3.3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000590s00022556.1	PF07714.12	Pkinase_Tyr	328	433	6.00E-18
Glyur000590s00022556.1	PF00069.20	Pkinase	482	613	8.30E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.188
SRR1783600	control	9.553
SRR1783602	moderate drought stress	5.497
SRR1811619	moderate drought stress	5.296

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.365
DRR006520	Root Summer glycyrrhizin high producing strain	7.323
DRR006521	Root Winter glycyrrhizin high producing strain	16.988
DRR006522	Root Winter glycyrrhizin high producing strain	16.306
DRR006523	Root Summer glycyrrhizin low producing strain	5.522
DRR006524	Root Summer glycyrrhizin low producing strain	5.468
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.655
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.570

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.137
SRR2868004	Drought Stress (root)	8.430
SRR2967015	Control (root)	8.085

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	12.863
SRR9715740	Leaf	12.428
SRR9715741	Leaf	8.885
SRR9715739	Root	2.320
SRR9715742	Root	6.181
SRR9715743	Root	4.653

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.672
SRR8749028	MeJA induced 9h	7.566
SRR8749029	MeJA induced 9h	9.218
SRR8749030	Uninduced	0.462
SRR8749031	Uninduced	0.283
SRR8749032	Uninduced	1.493

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	14.485
SRR8400027	Control - Root	18.929