Gene detail

Gene detail information of Glyur000590s00022548.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G19290.1	1.00E-67	ABRE binding factor 4
NR	XP_004505228.1	0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q9M7Q4\|AI5L5_ARATH	1.00E-103	ABSCISIC ACID-INSENSITIVE 5-like protein 5
trEMBL	tr\|V7CGM0\|V7CGM0_PHAVU	3.00E-179	Uncharacterized protein {ECO:0000313\|EMBL:ESW28503.1}

Sequence

Transcript Sequence

>Glyur000590s00022548.1
AAAAACTGCGATACGAAACCGATATTTTGAAAGCAAAAGTGGCAGTAGGCAGTGGCCGAGGCTCTCCTTATATAGAACCGAAGGCGGCACAAAGACACTTGTCGATTCCACCATACTCCCCATTCTGAAGAACATAGCAGCGACACGACACTACCCCCCCCAAACCAAGTCCTATGTCGATGAACTTAATAACCCCAACACACACTACACTACACTAACCTAAGATCTAAATCCAGGAAATCATTCCAAAGCACAGTGACTGAAAATACCACATGATCTACTTGAGCATGATTGATGTGTAAGATAGAGATTGTTTAAGTAAAGCTCTTACGTCTGCTTCAAGACTTTGAAAGTGGGGTCAAAAGATGAACTTCAGGAACTACGGTGATAACCCCACTTGGGATGCAATGAGTGGGAAGCCACTGGGAAATGCTACTTTGGCGAGACAGTCCTCAGTATACTCTCTGACTTTTGATGAGTTCCAGAACACCATTGGTGGAACTGGGAAGGATTTTGGGTCAATGAACATGGATGAACTCTTGAAAAACATATGGACAGCTGAGGAGACTTCAGCTGGTGGAGGTGAAGGGCACAGCCCAAGTGGTAATTTGCAAAGACAAGGTTCCTTGACATTGCCAAGAACTCTTAGTCAGAAAAGAGTTGATGAGGTTTGGAGGGATTTGATTAAAGATGGTANTGGTGGGGCCAAAGATGGGAGTAGTGGCAATGGTGGCTCATCTATGCCTCAAAGGCAACCAACATTGGGCGAAATGACTTTAGAGGAGTTTTTGGTGAAAGCTGGGGTTGTGAGAGAAGATATAGACATGCCTCAACAACAAATTGGAAGACCAAATAATGATAATGGATGGTTTAGTGACTTCTCTAGATCGAACAACAACTCTGGTCTACTTGGCTTTCAACAACCAAGTCGAAGTAATGGGAATTTGGGTGACAGGAACATGGTGGAGGGAAACAACATGGTTACTAAACACATTCTTCCTTCATCATTGAACTCAAACCACTCTCAGAGACAAGCACACCAGCAGCACCAGCCACCACTTTTCCCAAAACCAACAAATGTAGCATTTGCTTCTCCTATTCATTTGTTAAACAATGCTCAACTTGGTAATGGTAGCCCTGGCAGAAGGGGAGGAGGGATGATTGGAGTTCAAGAGCATTCAATGAATGGAACATCATTAGTTCACAGCAGTGCAGTGCCTGGTGCTGGAATGCTTGGTTTAGCCACAGCTCAAGGTGCTTCACCAGGAAGTAAAATATCACCTGATGGTACTACAAAGAGTAATGCAGATTCGTCTTTGCTTTCACCAGTTCCTTATGTAATCAACAGGGGAAGGAAGTGCGGTCCTATAGACAAAGTTGTTGAAAGGAGACAGAGGAGAATGATNAAAAATAGAGAATCAGCTGCAAGGTCACGGGCTCGCAAGCAGGCCTACACTATTGAGCTAGAGGCTGAAGTTGCAAAACTCAAGGAATTAAACAGGGAATTACAAATAAAACAGGCAGAAATTATGGAAATGCAGAAAAATAAGGATGACCGGCCACGGACAAATAAAAGACAATACTTGAGAAGGACACTTACGGGTCCGTGGTAGAGTATTATGTGGGTTGGTCTTTGTTTCTAAGTGACAGCTATACTCATGAAACCGTTGTCATGTCATAAGGACTGGAGTCATGTATTTAAGGTGTGAAGTAAATGCTCCAACATTAGACAGGGTGCATATTTAGTTTTCAATTGCAAATGTATGTTTGGGTCTAAAAGTATATTTGCTCAACAAGAATTCTATAATTACTTTGGTTCAAACTTATTTTTGCAATTTTCCAAAAAAACCAAACATGCACAGGGTAGTTGCTATTATGTATATAGGAACTAGGAGCGTTGACTTGTAAATTAGACTCACCATCTTGTATAATGAACTATTTTATTTGCTTGAATGCTAGTATTTTCTTATATATCTAGTATGATGCTCAGACAAGCTTATTGGACTGTCCATGCTTTTCACCTCTCTGTTCAATTTACATTTTAGTTTCTAATGTATTTACTAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00590	4168	7908	+

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000590s00022548.1	PF00170.16	bZIP_1	341	394	9.50E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.441
SRR1783600	control	5.452
SRR1783602	moderate drought stress	19.512
SRR1811619	moderate drought stress	19.422

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	51.799
DRR006520	Root Summer glycyrrhizin high producing strain	50.850
DRR006521	Root Winter glycyrrhizin high producing strain	254.426
DRR006522	Root Winter glycyrrhizin high producing strain	248.172
DRR006523	Root Summer glycyrrhizin low producing strain	70.341
DRR006524	Root Summer glycyrrhizin low producing strain	71.100
DRR006525	Leaf Summer glycyrrhizin high producing strain	37.193
DRR006526	Leaf Summer glycyrrhizin high producing strain	37.072

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	16.022
SRR2868004	Drought Stress (root)	21.704
SRR2967015	Control (root)	51.802

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.200
SRR9715740	Leaf	22.714
SRR9715741	Leaf	19.817
SRR9715739	Root	1.701
SRR9715742	Root	7.610
SRR9715743	Root	6.753

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	34.427
SRR8749028	MeJA induced 9h	61.401
SRR8749029	MeJA induced 9h	49.609
SRR8749030	Uninduced	26.807
SRR8749031	Uninduced	39.323
SRR8749032	Uninduced	22.859

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.699
SRR8400027	Control - Root	18.397