Gene detail information of Glyur000588s00020445 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G24430.1 | 2.00E-92 | HXXXD-type acyl-transferase family protein |
| NR | XP_003601841.1 | 0 | Vinorine synthase [Medicago truncatula] |
| Swissprot | tr|Q70PR7|VINSY_RAUSE | 3.00E-67 | Vinorine synthase |
| trEMBL | tr|G7J2I5|G7J2I5_MEDTR | 0 | Anthranilate N-benzoyltransferase {ECO:0000313|EMBL:AES72092.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00588 | 48760 | 52938 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000588s00020445.1 | PF02458.10 | Transferase | 4 | 409 | 3.10E-81 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.518 |
| SRR1783600 | control | 24.196 |
| SRR1783602 | moderate drought stress | 22.026 |
| SRR1811619 | moderate drought stress | 20.591 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.179 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.175 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 50.955 |
| SRR2868004 | Drought Stress (root) | 69.080 |
| SRR2967015 | Control (root) | 76.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.795 |
| SRR9715740 | Leaf | 0.652 |
| SRR9715741 | Leaf | 5.598 |
| SRR9715739 | Root | 37.106 |
| SRR9715742 | Root | 19.963 |
| SRR9715743 | Root | 24.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.564 |
| SRR8749028 | MeJA induced 9h | 189.709 |
| SRR8749029 | MeJA induced 9h | 55.075 |
| SRR8749030 | Uninduced | 81.957 |
| SRR8749031 | Uninduced | 82.629 |
| SRR8749032 | Uninduced | 82.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 85.399 |
| SRR8400027 | Control - Root | 77.640 |