Gene detail information of Glyur000588s00020444 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67700.2 | 6.00E-70 | |
| NR | KHN44402.1 | 6.23E-128 | hypothetical protein glysoja_014443 [Glycine soja] |
| trEMBL | tr|B9RMP2|B9RMP2_RICCO | 6.00E-126 | Oligopeptidase, putative {ECO:0000313|EMBL:EEF47565.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00588 | 41432 | 44212 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 25.273 |
| SRR1783600 | control | 24.450 |
| SRR1783602 | moderate drought stress | 21.567 |
| SRR1811619 | moderate drought stress | 21.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.159 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.333 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 29.187 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 29.058 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.564 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.552 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 135.995 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 135.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.100 |
| SRR2868004 | Drought Stress (root) | 31.843 |
| SRR2967015 | Control (root) | 26.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 180.036 |
| SRR9715740 | Leaf | 238.441 |
| SRR9715741 | Leaf | 176.773 |
| SRR9715739 | Root | 9.634 |
| SRR9715742 | Root | 18.218 |
| SRR9715743 | Root | 14.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 30.506 |
| SRR8749028 | MeJA induced 9h | 47.388 |
| SRR8749029 | MeJA induced 9h | 21.186 |
| SRR8749030 | Uninduced | 36.704 |
| SRR8749031 | Uninduced | 17.467 |
| SRR8749032 | Uninduced | 19.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 42.339 |
| SRR8400027 | Control - Root | 38.363 |