Gene detail information of Glyur000588s00020437 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67720.1 | 2.00E-74 | Leucine-rich repeat protein kinase family protein |
| NR | XP_004502339.1 | 3.53E-121 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720-like [Cicer arietinum] |
| Swissprot | tr|C0LGI2|Y1677_ARATH | 2.00E-86 | Probable LRR receptor-like serine/threonine-protein kinase At1g67720 (Precursor) |
| trEMBL | tr|A0A072UZQ6|A0A072UZQ6_MEDTR | 3.00E-121 | LRR receptor-like kinase {ECO:0000313|EMBL:KEH35279.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00588 | 5987 | 7733 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000588s00020437.1 | PF12819.2 | Malectin_like | 28 | 207 | 1.80E-50 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.819 |
| SRR1783600 | control | 20.430 |
| SRR1783602 | moderate drought stress | 14.979 |
| SRR1811619 | moderate drought stress | 14.917 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.041 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.958 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.079 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.956 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.962 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.978 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.781 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.400 |
| SRR2868004 | Drought Stress (root) | 20.480 |
| SRR2967015 | Control (root) | 22.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.185 |
| SRR9715740 | Leaf | 4.465 |
| SRR9715741 | Leaf | 5.560 |
| SRR9715739 | Root | 0.752 |
| SRR9715742 | Root | 12.748 |
| SRR9715743 | Root | 10.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.844 |
| SRR8749028 | MeJA induced 9h | 0.512 |
| SRR8749029 | MeJA induced 9h | 0.201 |
| SRR8749030 | Uninduced | 0.590 |
| SRR8749031 | Uninduced | 0.231 |
| SRR8749032 | Uninduced | 0.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.888 |
| SRR8400027 | Control - Root | 46.625 |