Gene detail information of Glyur000587s00026626 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G43540.1 | 4.00E-133 | Protein of unknown function (DUF1350) |
| NR | XP_004498831.1 | 0 | PREDICTED: uncharacterized protein LOC101514791 [Cicer arietinum] |
| COG | YP_007131573.1 | 2.00E-44 | protein of unknown function DUF1350 [Stanieria cyanosphaera PCC 7437] |
| trEMBL | tr|K7MNA8|K7MNA8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G33600.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00587 | 83456 | 92987 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000587s00026626.1 | PF07082.6 | DUF1350 | 99 | 389 | 3.60E-50 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.730 |
| SRR1783600 | control | 3.917 |
| SRR1783602 | moderate drought stress | 2.777 |
| SRR1811619 | moderate drought stress | 2.646 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.961 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.044 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.104 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.082 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.891 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.441 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 48.740 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 47.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.199 |
| SRR2868004 | Drought Stress (root) | 8.981 |
| SRR2967015 | Control (root) | 8.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 66.940 |
| SRR9715740 | Leaf | 128.616 |
| SRR9715741 | Leaf | 52.035 |
| SRR9715739 | Root | 1.554 |
| SRR9715742 | Root | 3.934 |
| SRR9715743 | Root | 2.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.570 |
| SRR8749028 | MeJA induced 9h | 3.870 |
| SRR8749029 | MeJA induced 9h | 4.454 |
| SRR8749030 | Uninduced | 2.024 |
| SRR8749031 | Uninduced | 0.641 |
| SRR8749032 | Uninduced | 1.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.367 |
| SRR8400027 | Control - Root | 11.681 |