Gene detail information of Glyur000586s00021851 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13670.1 | 8.00E-40 | Protein kinase family protein |
| NR | XP_003621013.1 | 3.66E-46 | Casein kinase I isoform alpha [Medicago truncatula] |
| Swissprot | tr|P42158|KC1D_ARATH | 4.00E-17 | Casein kinase I isoform delta-like |
| trEMBL | tr|I1KZH8|I1KZH8_SOYBN | 6.00E-47 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G47680.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00586 | 125093 | 137866 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.183 |
| SRR1783600 | control | 5.464 |
| SRR1783602 | moderate drought stress | 5.119 |
| SRR1811619 | moderate drought stress | 5.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.611 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.217 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.320 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.152 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.278 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.740 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.468 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.840 |
| SRR2868004 | Drought Stress (root) | 8.163 |
| SRR2967015 | Control (root) | 7.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.833 |
| SRR9715740 | Leaf | 0.486 |
| SRR9715741 | Leaf | 1.168 |
| SRR9715739 | Root | 0.370 |
| SRR9715742 | Root | 1.752 |
| SRR9715743 | Root | 1.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.496 |
| SRR8749028 | MeJA induced 9h | 23.284 |
| SRR8749029 | MeJA induced 9h | 16.856 |
| SRR8749030 | Uninduced | 26.229 |
| SRR8749031 | Uninduced | 16.733 |
| SRR8749032 | Uninduced | 14.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.151 |
| SRR8400027 | Control - Root | 5.614 |