Gene detail information of Glyur000586s00021847.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G21150.1 | 8.00E-18 | B-box 32 |
| NR | XP_003530172.1 | 1.71E-90 | PREDICTED: uncharacterized protein LOC100781783 [Glycine max] |
| Swissprot | tr|Q9LJB7|BBX32_ARATH | 2.00E-23 | B-box zinc finger protein 32 {ECO:0000303|PubMed:19920209} |
| trEMBL | tr|I1KGP6|I1KGP6_SOYBN | 6.00E-91 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G02320.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00586 | 84414 | 85157 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Orphans |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000586s00021847.1 | PF00643.19 | zf-B_box | 6 | 49 | 7.30E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.458 |
| SRR1783600 | control | 3.378 |
| SRR1783602 | moderate drought stress | 14.304 |
| SRR1811619 | moderate drought stress | 14.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.775 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.512 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.134 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.253 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.796 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.278 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.355 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.865 |
| SRR2868004 | Drought Stress (root) | 24.168 |
| SRR2967015 | Control (root) | 11.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.921 |
| SRR9715740 | Leaf | 22.771 |
| SRR9715741 | Leaf | 19.779 |
| SRR9715739 | Root | 9.531 |
| SRR9715742 | Root | 5.954 |
| SRR9715743 | Root | 8.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.821 |
| SRR8749028 | MeJA induced 9h | 15.618 |
| SRR8749029 | MeJA induced 9h | 17.954 |
| SRR8749030 | Uninduced | 7.467 |
| SRR8749031 | Uninduced | 6.050 |
| SRR8749032 | Uninduced | 11.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.934 |
| SRR8400027 | Control - Root | 3.974 |