Gene detail information of Glyur000586s00021834 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78880.1 | 1.00E-175 | Ubiquitin-specific protease family C19-related protein |
| NR | KHN38065.1 | 0 | Putative membrane protein [Glycine soja] |
| Swissprot | tr|Q9FZ45|Y1686_ARATH | 0 | Uncharacterized membrane protein At1g16860 |
| trEMBL | tr|I1KVQ0|I1KVQ0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G23650.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00586 | 10629 | 16412 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.656 |
| SRR1783600 | control | 20.644 |
| SRR1783602 | moderate drought stress | 18.178 |
| SRR1811619 | moderate drought stress | 17.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.736 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.726 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.200 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.576 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.071 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.200 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.175 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.243 |
| SRR2868004 | Drought Stress (root) | 32.998 |
| SRR2967015 | Control (root) | 47.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.867 |
| SRR9715740 | Leaf | 15.816 |
| SRR9715741 | Leaf | 19.092 |
| SRR9715739 | Root | 12.535 |
| SRR9715742 | Root | 15.647 |
| SRR9715743 | Root | 15.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 37.396 |
| SRR8749028 | MeJA induced 9h | 78.546 |
| SRR8749029 | MeJA induced 9h | 47.147 |
| SRR8749030 | Uninduced | 15.224 |
| SRR8749031 | Uninduced | 19.726 |
| SRR8749032 | Uninduced | 22.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.237 |
| SRR8400027 | Control - Root | 26.978 |