Gene detail information of Glyur000586s00021833 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G16080.1 | 1.00E-91 | |
| NR | XP_003530189.1 | 9.03E-141 | PREDICTED: uncharacterized protein LOC100795565 isoform X1 [Glycine max] |
| trEMBL | tr|I1KGQ2|I1KGQ2_SOYBN | 3.00E-141 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G02370.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00586 | 3884 | 7406 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.107 |
| SRR1783600 | control | 3.288 |
| SRR1783602 | moderate drought stress | 2.165 |
| SRR1811619 | moderate drought stress | 2.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.659 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.759 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.336 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.255 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.580 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.983 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 208.931 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 206.867 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.109 |
| SRR2868004 | Drought Stress (root) | 11.770 |
| SRR2967015 | Control (root) | 13.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 254.077 |
| SRR9715740 | Leaf | 705.804 |
| SRR9715741 | Leaf | 315.649 |
| SRR9715739 | Root | 1.451 |
| SRR9715742 | Root | 4.453 |
| SRR9715743 | Root | 3.953 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 39.137 |
| SRR8749028 | MeJA induced 9h | 40.605 |
| SRR8749029 | MeJA induced 9h | 51.774 |
| SRR8749030 | Uninduced | 15.365 |
| SRR8749031 | Uninduced | 3.755 |
| SRR8749032 | Uninduced | 15.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.529 |
| SRR8400027 | Control - Root | 8.762 |