Gene detail information of Glyur000585s00027747 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18050.1 | 2.00E-80 | |
| NR | XP_003528967.1 | 3.82E-141 | PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Glycine max] |
| Swissprot | tr|Q9SUC9|UGPI7_ARATH | 4.00E-58 | Uncharacterized GPI-anchored protein At4g28100 (Precursor) |
| trEMBL | tr|I1KJ34|I1KJ34_SOYBN | 1.00E-141 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G11300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00585 | 106964 | 111553 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.375 |
| SRR1783600 | control | 4.396 |
| SRR1783602 | moderate drought stress | 3.916 |
| SRR1811619 | moderate drought stress | 3.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.823 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.851 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.098 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.096 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.009 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.299 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.491 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.879 |
| SRR2868004 | Drought Stress (root) | 6.873 |
| SRR2967015 | Control (root) | 6.686 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.391 |
| SRR9715740 | Leaf | 0.844 |
| SRR9715741 | Leaf | 1.127 |
| SRR9715739 | Root | 6.949 |
| SRR9715742 | Root | 6.408 |
| SRR9715743 | Root | 5.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.841 |
| SRR8749028 | MeJA induced 9h | 0.295 |
| SRR8749029 | MeJA induced 9h | 0.407 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.034 |
| SRR8749032 | Uninduced | 0.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.388 |
| SRR8400027 | Control - Root | 5.049 |