Gene detail

Gene detail information of Glyur000585s00027743

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G18160.1	0	Protein kinase superfamily protein
NR	XP_003528971.1	0	PREDICTED: serine/threonine-protein kinase EDR1-like [Glycine max]
COG	YP_001958461.1	5.00E-48	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9FPR3\|EDR1_ARATH	1.00E-142	Serine/threonine-protein kinase EDR1
trEMBL	tr\|I1KJ44\|I1KJ44_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G11430.1}

Sequence

Transcript Sequence

>Glyur000585s00027743.1
ATGAAGAACATTCTTAAGAAACTTCATATCATGCCTAATAACCAATCAGAAAATGAACCAAAGTCTTCTTCATCAGAGGGAAACAAGTCAAATCATGGTTCATCATCATCATCCTCTAAGAAGCTTTTGCGGTTCCCTCAAAGTTCTGAGCACAAACCCTTTTCTGGTCTCTCCAGTTGGTTGCATTCAGTTGCTAATAATAGGCAGAGTCCTAGTCCTCCATCACTGAACAAGGGAAAAGCACAGAGAATGGAGCCATCTGACACAGTGAGTAGTGGTGGTTTGGATGTTGTTTCAGATTCAGCTAGGCCTGATTCAGGGTCTAGTGCTGGTTCGATTTCGAGGGATCATGAAGTCGAAGAGGAAGAGTATCAGATACAACTGGCTTTAGAGCTGAGTGCAAAGGAGGATCCTGAGGCTGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTGGGGTCTTGTGACCCTGATAATACACCAGCTGAAGTTGTCGCCTACCGATACTGGAATTACAATGCTCTTGGTTATGATGACAAAATCTTGGACGGCTTCTATGATCTGTATGGGATCTTAACCGAGTCAAACTCTGCGAGAATGCCTTCCCTCGTAGATCTGCAAGGAAGATCAATCTCAGGCAGTGTCACATGGGAGGCTGTATTGGTCAATAGGGCTGCTGATTCCAATTTGTTGAAACTGGAGCAAAAAGCCCTAGAGCTGACTGTCAAATCAACATCTGATTNTGAAGTAGTTATAGATAGTCATTTGGTGCGCAAGCTTGCAATGTTTGTGGCTGACTATATGGGAGGACCAGTTGGAGATCCTGAAAGCATGGCAAGAGCATGGAGGAGTCTTAGTTACAGTTTGAAAGCAACTCTTGGTAGCATGGTTTTGCCGCTTGGTTCTCTAACTATTGGATTGGCTCGGCATCGCGCATTGTTATATAAGGTTCTAGCTGATAGTTTGGGCATCCCATCTCGATTGGTGAAAGGATCGCAATATACAGGTTCCGATGATGTGGCAATAAACTTCGTCAAGATCGATGATGGAAGGGAGTACATTGTTGACTTAATGGCAGATCCCGGAACTCTTATTCCATCTGATGCTACTGGATCACACATTGAGTATGACGAATCCTTTTTTATGGCCAGTCCTTTATCGAGAGACTTTGATTCCTCTCGTGTAGCATCCTCCAGTAGTGGGGTTGGAAGTTATTTTGAAGAAACTTCAGATTTTGGGATGTCAGACAGAGGAAAAAACAGGTCAAAACATTCTTCCTGTTNAGAGAAAGAATCCGGTGTCCCCGGCAGGCCTACCACAAGAAAGGAAGAACCAATGAGACCCTTGAATGAATTCAAAATTCCTCACTGTGTTAATAAGATCATGGGTCAGGAAGCTCGTGGCAGACCTAATCATCATCCATATGTGCATACAAGATCTTCTTCTTGGACTGAAGGGATCAGTTCCCCGGCAGTACATAGAATGAAAGCCAAAGATGTTTCCCAATACATGATTGATACTGCCAAGGAGAATCCTCACTTAGCTCAGAAACTTCATGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAATTTATTCTCTGACATTTATCATGAGGAATTAGGTTCCCTAACTGAGGCCAACTTCGCAACTGAAGAAAAAGATCAACATAAAAAGGGAAGTGAACAGCAAGAAAGTGAAGTTGATGACAGTCTTGGTCCTGCTCGATTTTTGCCTCCCTTGCCTCACTACGGAGTTCATCCCAAAGCGAGTTCTGGCAGTCAGATGGAGCATTCTAAGCGTGTAGAAGGTTTAGGAACCAATCTTCCTCTTCATACAAGGGAAGCAGCTGGACAACAGCTTATACCAACTCAGGTAAAATATGGGAAAAATGTACCAGTTGCTGCGGCTGCTGCAGCTGCTGCCGCTGTTGTTGCATCTTCTATGGTAGTTGCTGTGGCAAAGAAGTCAAGCACTGACTCAAACATTGAGCTTCCGGTAACGGCAGCTGCTACTGCTACTGCTGCAGTTGTAGTAGCAACCACTGCTGCTGTGAGTAAACAGTATGAACAGAGCAGTCGAAGTGATGGAGATACGGATAGTGCTGGTTATGAGCAGAAGGGTAGCGGTGATGGAGAGCATTTTGCTTTGGGAATGAATTTAGAAGTCGAGAGAAAATCTGATAGCTCAGTTGTAAGTAATGATAGCAGGAAATCTGATTCTGCTTTAGATGATGTTGCCGAGTATGAAATTCCATGGGAGGAAATCACGTTGGGTGAGCGTATCGGTCTTGGATCATATGGGGAGGTGTACCGTGGTGAATGGCGAGGAACTGAAGTTGCTGTAAAGAGGTTTTTAAATCAAGATATATCTGGTGATTCACTTGAAGAATTCAAAACTGAGGTCAAAATAATGAAAAGGTTGAGGCATCCAAATGTCGTTCTCTTCATGGGAGCTGTAACTCGACCTCCAAATCTTTCAATTGTTACTGAATTTCTTCCCAGGGGAAGTTTGTATAGATTAATTCACCGGCCAAACAGTCAATTAGATGAGAGAAGGCGCTTGAGAATGGCCCTTGATACTGCTCGAGGAATGAACTATTTGCACAGCTGCAGTCCAATGATAGTGCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAATTGGGTTGTAAAGGTATGTGATTTTGGCTTATCGCGTATGAAGCATAGCACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCTGAGGTGTTGAGAAATGAACCATCAAATGAAAAGTGTGANGTTTATAGCTTTGGGGTCATATTATGGGAGCTATCTACTTTGCAGCAGCCCTGGGGAGGAATGAATCCAATGCAAGTTGTCGGTGCTGTGGGTTTCCAACATCGCCGTCTTGACATTCCAGATGATATGGACCCTGCCATTGCAGATATTATCAGGAAATGTTGGCAGACAGATCCAAAGTTGAGACCTACATTTGCCGAGATATTGGCGGCTTTGAAGCCATTACAGAAGCCAATTATTGGTTCTCAAGTACCGAGACCGATTGCATCAGGTAGGCATCATGAGAAGGCTCAATCATCAGTTGCAGAAGACACGGAAAGATAGGAAACAATCATACAACTAACCAAATCTTTGTTCATTTTGCTGGCTAAGAAGTGGAGGGGGCTAGCTGTATAGTATCAATGTTGTGATTTTTTTCACTCTTGTTCCTTTCCTTTTCATTTCTATTTTTT

Protein Sequence

>Glyur000585s00027743.1
MKNILKKLHIMPNNQSENEPKSSSSEGNKSNHGSSSSSSKKLLRFPQSSEHKPFSGLSSWLHSVANNRQSPSPPSLNKGKAQRMEPSDTVSSGGLDVVSDSARPDSGSSAGSISRDHEVEEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKILDGFYDLYGILTESNSARMPSLVDLQGRSISGSVTWEAVLVNRAADSNLLKLEQKALELTVKSTSDXEVVIDSHLVRKLAMFVADYMGGPVGDPESMARAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLYKVLADSLGIPSRLVKGSQYTGSDDVAINFVKIDDGREYIVDLMADPGTLIPSDATGSHIEYDESFFMASPLSRDFDSSRVASSSSGVGSYFEETSDFGMSDRGKNRSKHSSCXEKESGVPGRPTTRKEEPMRPLNEFKIPHCVNKIMGQEARGRPNHHPYVHTRSSSWTEGISSPAVHRMKAKDVSQYMIDTAKENPHLAQKLHDVLLESGVVAPPNLFSDIYHEELGSLTEANFATEEKDQHKKGSEQQESEVDDSLGPARFLPPLPHYGVHPKASSGSQMEHSKRVEGLGTNLPLHTREAAGQQLIPTQVKYGKNVPVAAAAAAAAAVVASSMVVAVAKKSSTDSNIELPVTAAATATAAVVVATTAAVSKQYEQSSRSDGDTDSAGYEQKGSGDGEHFALGMNLEVERKSDSSVVSNDSRKSDSALDDVAEYEIPWEEITLGERIGLGSYGEVYRGEWRGTEVAVKRFLNQDISGDSLEEFKTEVKIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNSQLDERRRLRMALDTARGMNYLHSCSPMIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCXVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDMDPAIADIIRKCWQTDPKLRPTFAEILAALKPLQKPIIGSQVPRPIASGRHHEKAQSSVAEDTER

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00585	36178	46073	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:2.1.3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000585s00027743.1	PF14381.1	EDR1	159	365	1.40E-70
Glyur000585s00027743.1	PF07714.12	Pkinase_Tyr	756	1007	1.80E-66

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.307
SRR1783600	control	1.317
SRR1783602	moderate drought stress	1.386
SRR1811619	moderate drought stress	1.350

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.728
DRR006520	Root Summer glycyrrhizin high producing strain	0.634
DRR006521	Root Winter glycyrrhizin high producing strain	0.068
DRR006522	Root Winter glycyrrhizin high producing strain	0.066
DRR006523	Root Summer glycyrrhizin low producing strain	1.024
DRR006524	Root Summer glycyrrhizin low producing strain	0.876
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.765
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.709

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	14.532
SRR2868004	Drought Stress (root)	22.422
SRR2967015	Control (root)	22.368

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.361
SRR9715740	Leaf	4.290
SRR9715741	Leaf	9.666
SRR9715739	Root	1.389
SRR9715742	Root	3.090
SRR9715743	Root	3.369

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.067
SRR8749028	MeJA induced 9h	2.896
SRR8749029	MeJA induced 9h	2.549
SRR8749030	Uninduced	5.298
SRR8749031	Uninduced	6.526
SRR8749032	Uninduced	1.863

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.708
SRR8400027	Control - Root	9.681