Gene detail information of Glyur000583s00027199 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32090.1 | 1.00E-19 | Beta-1,3-N-Acetylglucosaminyltransferase family protein |
| NR | NP_001235003.1 | 1.10E-59 | uncharacterized protein LOC100527363 precursor [Glycine max] |
| trEMBL | tr|C6T437|C6T437_SOYBN | 4.00E-60 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G13700.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00583 | 12779 | 13596 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.427 |
| SRR1783600 | control | 1.388 |
| SRR1783602 | moderate drought stress | 0.686 |
| SRR1811619 | moderate drought stress | 0.778 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.240 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.813 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.765 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.730 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.846 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.473 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.993 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.858 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.769 |
| SRR2868004 | Drought Stress (root) | 35.137 |
| SRR2967015 | Control (root) | 42.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 49.966 |
| SRR9715740 | Leaf | 88.606 |
| SRR9715741 | Leaf | 158.289 |
| SRR9715739 | Root | 5.785 |
| SRR9715742 | Root | 29.145 |
| SRR9715743 | Root | 26.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 54.977 |
| SRR8749028 | MeJA induced 9h | 85.448 |
| SRR8749029 | MeJA induced 9h | 66.710 |
| SRR8749030 | Uninduced | 107.455 |
| SRR8749031 | Uninduced | 87.038 |
| SRR8749032 | Uninduced | 86.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.328 |
| SRR8400027 | Control - Root | 20.833 |