Gene detail information of Glyur000581s00027350 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G26040.1 | 6.00E-47 | HXXXD-type acyl-transferase family protein |
| NR | XP_006595340.1 | 0 | PREDICTED: vinorine synthase-like [Glycine max] |
| Swissprot | tr|Q9FI40|BAHD1_ARATH | 6.00E-47 | BAHD acyltransferase At5g47980 |
| trEMBL | tr|I1LY34|I1LY34_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G16780.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00581 | 106190 | 108220 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000581s00027350.1 | PF02458.10 | Transferase | 1 | 239 | 1.40E-45 |
| Glyur000581s00027350.1 | PF02458.10 | Transferase | 241 | 398 | 1.50E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.383 |
| SRR1783600 | control | 0.401 |
| SRR1783602 | moderate drought stress | 0.091 |
| SRR1811619 | moderate drought stress | 0.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.413 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.433 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.795 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.486 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.428 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.354 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.751 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.592 |
| SRR2868004 | Drought Stress (root) | 1.021 |
| SRR2967015 | Control (root) | 0.425 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.903 |
| SRR9715740 | Leaf | 0.128 |
| SRR9715741 | Leaf | 0.336 |
| SRR9715739 | Root | 0.428 |
| SRR9715742 | Root | 0.545 |
| SRR9715743 | Root | 0.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.817 |
| SRR8400027 | Control - Root | 3.592 |