Gene detail information of Glyur000580s00024212 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G50780.1 | 1.00E-175 | |
| NR | XP_003517262.1 | 0 | PREDICTED: BTB/POZ domain-containing protein At3g50780-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9SVM0|Y3078_ARATH | 0 | BTB/POZ domain-containing protein At3g50780 |
| trEMBL | tr|I1J908|I1J908_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G38660.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00580 | 122474 | 127659 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 37.776 |
| SRR1783600 | control | 35.829 |
| SRR1783602 | moderate drought stress | 41.764 |
| SRR1811619 | moderate drought stress | 41.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 33.523 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.761 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.485 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.968 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.364 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.268 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.063 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.003 |
| SRR2868004 | Drought Stress (root) | 27.840 |
| SRR2967015 | Control (root) | 30.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.241 |
| SRR9715740 | Leaf | 3.815 |
| SRR9715741 | Leaf | 3.756 |
| SRR9715739 | Root | 9.963 |
| SRR9715742 | Root | 22.810 |
| SRR9715743 | Root | 20.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.390 |
| SRR8749028 | MeJA induced 9h | 8.837 |
| SRR8749029 | MeJA induced 9h | 8.237 |
| SRR8749030 | Uninduced | 4.290 |
| SRR8749031 | Uninduced | 3.274 |
| SRR8749032 | Uninduced | 4.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 57.595 |
| SRR8400027 | Control - Root | 57.140 |