Gene detail information of Glyur000578s00021006 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G28910.2 | 1.00E-175 | |
| NR | KHN04942.1 | 0 | hypothetical protein glysoja_013849 [Glycine soja] |
| trEMBL | tr|K7N509|K7N509_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G36630.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00578 | 74236 | 78942 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.755 |
| SRR1783600 | control | 5.486 |
| SRR1783602 | moderate drought stress | 10.156 |
| SRR1811619 | moderate drought stress | 9.577 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.564 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.837 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.580 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.093 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.508 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.526 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.030 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.828 |
| SRR2868004 | Drought Stress (root) | 25.769 |
| SRR2967015 | Control (root) | 36.305 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.819 |
| SRR9715740 | Leaf | 28.122 |
| SRR9715741 | Leaf | 26.294 |
| SRR9715739 | Root | 4.092 |
| SRR9715742 | Root | 9.741 |
| SRR9715743 | Root | 9.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.520 |
| SRR8749028 | MeJA induced 9h | 1.569 |
| SRR8749029 | MeJA induced 9h | 2.291 |
| SRR8749030 | Uninduced | 0.617 |
| SRR8749031 | Uninduced | 0.538 |
| SRR8749032 | Uninduced | 1.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.649 |
| SRR8400027 | Control - Root | 16.599 |