Gene detail information of Glyur000578s00020998 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G04350.1 | 0 | Plant protein of unknown function (DUF946) |
| NR | XP_004495588.1 | 0 | PREDICTED: uncharacterized protein LOC101489287 [Cicer arietinum] |
| trEMBL | tr|I1NIS9|I1NIS9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G37110.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00578 | 41732 | 44865 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000578s00020998.1 | PF06101.6 | DUF946 | 21 | 563 | 1.40E-260 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 29.477 |
| SRR1783600 | control | 27.697 |
| SRR1783602 | moderate drought stress | 52.898 |
| SRR1811619 | moderate drought stress | 52.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 62.143 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 62.814 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.966 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 28.083 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 51.395 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 52.726 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.409 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 96.924 |
| SRR2868004 | Drought Stress (root) | 155.765 |
| SRR2967015 | Control (root) | 167.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 60.757 |
| SRR9715740 | Leaf | 52.580 |
| SRR9715741 | Leaf | 95.247 |
| SRR9715739 | Root | 29.108 |
| SRR9715742 | Root | 49.694 |
| SRR9715743 | Root | 43.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 29.805 |
| SRR8749028 | MeJA induced 9h | 52.958 |
| SRR8749029 | MeJA induced 9h | 32.252 |
| SRR8749030 | Uninduced | 41.976 |
| SRR8749031 | Uninduced | 128.089 |
| SRR8749032 | Uninduced | 72.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 82.872 |
| SRR8400027 | Control - Root | 70.786 |