Gene detail

Gene detail information of Glyur000577s00027230

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G01100.1	2.00E-137	adenine nucleotide transporter 1
NR	AES93971.2	0	substrate carrier family protein [Medicago truncatula]
Swissprot	tr\|O04619\|ADNT1_ARATH	0	Mitochondrial adenine nucleotide transporter ADNT1
trEMBL	tr\|G7KAM5\|G7KAM5_MEDTR	0	Substrate carrier family protein {ECO:0000313\|EMBL:AES93971.2}

Sequence

Transcript Sequence

>Glyur000577s00027230.1
ACAAAAAATAAAAATAAAAGGCCCCAAAATTACAGAAATACCAACCCAGAAGTCACCGGTCACACGCTAATAGACGCAGACGCACGCATATAGTATAATGGTTGCGACTTGATTTTCGAAAGGAAAATCCGAGAGCAAGGAAATTTTNGTTACTTTCCTTTTCTCTCTTCTCTCCGCTAGCAACAGTCCTCCACCATATATAATACATAACCGTTAAAATTCGTTCATTTTTTGGGTTCCGGCTTCANTAATGGCGTCCCAAGATGCGCTCGGAAAGACAACTGATCAATCTACAGCCTCCGCGAATATCGCCGGAGAAGCAAAACTTTCCGGTGAAGGTGCNAAACCTCGTACTGATCATGCCTTTCTTAGTATCTGCAAGTCTCTAGTCGCCGGTGGAGTCGCCGGTGGAGTGTCACGAACAGCTGTGGCTCCCCTAGAGAGATTAAAGATTCTGCTGCAGGTTCAAAACCGTCACCATGTAAAATACAACGGAACAATTCAAGGCTTAAAATATATATGGAAAACCGAGGGGTTTAGGGGAATGTTTAAAGGAAACGGAACTAATTGTGCTCGTATTGTCCCAAATTCAGCAGTGAAGTTCTTTAGTTATGAGGAAGCATCCAAGGGTATTTTATTGCTACACAAGTGGCAAACTGGAAATGAAGAAGCTCANCTCACTCCTCTTCTGCGTCTTGGAGCTGGAGCATGTGCCGGAATCATTGCCATGTCAGCAACTTACCCTATGGACCTGGTGCGAGGACGGTTGACTGTACAGACAGAAGCATCTCCTCGTCAATACAGAGGAATTTTTCATGCTCTTTCAACAGTCTTTCGAGAAGAAGGGGCTCGAGCATTGTATAAAGGATGGCTACCTTCAGTCATAGGAGTTATACCATATGTGGGTCTTAATTTTTCTGTATACGAATCTCTCAAAGACTGGTTGATTCAAACCAAACCACTTGGAATAGCACAAGACTCGGAGCTAAGTGTGACCACAAGGCTTGCATGCGGGGCTGCTGCTGGAACTGTTGGCCAAACAGTGGCATACCCACTTGATGTCATTCGCCGCAGAATGCAGATGGTGGGATGGAAAGGTGCTGCTCCGGTTGTAGCTGGTGAAGGGAAGGGAAAGACTGAGTATANTGGCATGGTTGATGCATTCAGGAAAACCGTTCAGTATGAGGGATTTGGAGCATTATACAAGGGCTTAGTCCCCAATTCAGTGAAGGTGGTCCCTTCTATNGCTATTGCTTTCGTGACATACGAGATGGTCAAGGACATTCTTGGAGTTGAAATGAGAATATCTGACTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00577	91310	95563	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055085 transmembrane transport

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000577s00027230.1	PF00153.22	Mito_carr	41	126	2.30E-24
Glyur000577s00027230.1	PF00153.22	Mito_carr	144	234	1.80E-26
Glyur000577s00027230.1	PF00153.22	Mito_carr	245	346	1.50E-26

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.428
SRR1783600	control	0.438
SRR1783602	moderate drought stress	0.363
SRR1811619	moderate drought stress	0.339

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.316
DRR006520	Root Summer glycyrrhizin high producing strain	1.377
DRR006521	Root Winter glycyrrhizin high producing strain	0.254
DRR006522	Root Winter glycyrrhizin high producing strain	0.248
DRR006523	Root Summer glycyrrhizin low producing strain	3.421
DRR006524	Root Summer glycyrrhizin low producing strain	3.204
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.523
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.416

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	39.611
SRR2868004	Drought Stress (root)	48.626
SRR2967015	Control (root)	49.588

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	11.221
SRR9715740	Leaf	7.174
SRR9715741	Leaf	17.456
SRR9715739	Root	0.411
SRR9715742	Root	3.343
SRR9715743	Root	2.579

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.087
SRR8749028	MeJA induced 9h	12.332
SRR8749029	MeJA induced 9h	12.785
SRR8749030	Uninduced	12.929
SRR8749031	Uninduced	10.360
SRR8749032	Uninduced	7.300

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	11.312
SRR8400027	Control - Root	8.773