Gene detail information of Glyur000577s00027229 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G41810.1 | 1.00E-22 | |
| NR | KHN35069.1 | 2.22E-63 | hypothetical protein glysoja_004835 [Glycine soja] |
| trEMBL | tr|K7LMK9|K7LMK9_SOYBN | 3.00E-63 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G02081.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00577 | 83154 | 83666 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.579 |
| SRR1783600 | control | 1.611 |
| SRR1783602 | moderate drought stress | 2.501 |
| SRR1811619 | moderate drought stress | 2.630 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.935 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.838 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.218 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.861 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.863 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.365 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.722 |
| SRR2868004 | Drought Stress (root) | 27.229 |
| SRR2967015 | Control (root) | 26.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.386 |
| SRR9715740 | Leaf | 1.306 |
| SRR9715741 | Leaf | 1.930 |
| SRR9715739 | Root | 1.494 |
| SRR9715742 | Root | 2.479 |
| SRR9715743 | Root | 1.969 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.125 |
| SRR8749028 | MeJA induced 9h | 0.438 |
| SRR8749029 | MeJA induced 9h | 0.625 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.669 |
| SRR8400027 | Control - Root | 5.626 |