Gene detail information of Glyur000577s00027223 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003611005.1 | 8.12E-25 | hypothetical protein MTR_5g009420 [Medicago truncatula] |
| trEMBL | tr|G7KAL7|G7KAL7_MEDTR | 3.00E-25 | Transmembrane protein, putative {ECO:0000313|EMBL:AES93963.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00577 | 39995 | 40663 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.067 |
| SRR1783600 | control | 1.993 |
| SRR1783602 | moderate drought stress | 2.223 |
| SRR1811619 | moderate drought stress | 2.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.045 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.873 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.667 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.430 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.685 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.002 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.597 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.923 |
| SRR2868004 | Drought Stress (root) | 6.881 |
| SRR2967015 | Control (root) | 6.467 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.219 |
| SRR9715740 | Leaf | 1.097 |
| SRR9715741 | Leaf | 5.435 |
| SRR9715739 | Root | 18.755 |
| SRR9715742 | Root | 57.041 |
| SRR9715743 | Root | 52.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 27.587 |
| SRR8749028 | MeJA induced 9h | 35.100 |
| SRR8749029 | MeJA induced 9h | 33.676 |
| SRR8749030 | Uninduced | 19.821 |
| SRR8749031 | Uninduced | 10.107 |
| SRR8749032 | Uninduced | 14.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.336 |
| SRR8400027 | Control - Root | 1.374 |