Gene detail information of Glyur000575s00024840 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01680.1 | 7.00E-37 | |
| NR | ABV32453.1 | 0 | forisome [Canavalia gladiata] |
| trEMBL | tr|A8C976|A8C976_CANGL | 0 | Forisome {ECO:0000313|EMBL:ABV32453.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00575 | 137288 | 142711 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000575s00024840.1 | PF14576.1 | SEO_N | 23 | 288 | 4.00E-87 |
| Glyur000575s00024840.1 | PF14577.1 | SEO_C | 419 | 620 | 1.70E-56 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.806 |
| SRR1783600 | control | 4.734 |
| SRR1783602 | moderate drought stress | 3.632 |
| SRR1811619 | moderate drought stress | 3.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.835 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.821 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.027 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.002 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.514 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.953 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.726 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.466 |
| SRR2868004 | Drought Stress (root) | 17.329 |
| SRR2967015 | Control (root) | 21.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.281 |
| SRR9715740 | Leaf | 1.186 |
| SRR9715741 | Leaf | 1.858 |
| SRR9715739 | Root | 1.549 |
| SRR9715742 | Root | 8.843 |
| SRR9715743 | Root | 7.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.251 |
| SRR8400027 | Control - Root | 13.557 |