Gene detail information of Glyur000575s00024820 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G73360.1 | 3.00E-04 | homeodomain GLABROUS 11 |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00575 | 1480 | 8704 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.517 |
| SRR1783600 | control | 5.367 |
| SRR1783602 | moderate drought stress | 6.821 |
| SRR1811619 | moderate drought stress | 6.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.210 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.126 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.439 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.438 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.257 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.033 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.523 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.247 |
| SRR2868004 | Drought Stress (root) | 0.084 |
| SRR2967015 | Control (root) | 0.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.344 |
| SRR9715740 | Leaf | 0.420 |
| SRR9715741 | Leaf | 0.435 |
| SRR9715739 | Root | 0.405 |
| SRR9715742 | Root | 0.911 |
| SRR9715743 | Root | 0.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.290 |
| SRR8749028 | MeJA induced 9h | 0.735 |
| SRR8749029 | MeJA induced 9h | 0.387 |
| SRR8749030 | Uninduced | 0.020 |
| SRR8749031 | Uninduced | 0.101 |
| SRR8749032 | Uninduced | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.284 |
| SRR8400027 | Control - Root | 4.586 |