Gene detail information of Glyur000573s00021780


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G39390.12.00E-56Ribosomal L29 family protein
NRAFK34682.11.54E-75unknown [Lotus japonicus]
COGYP_002250709.11.00E-07ribosomal protein L29 [Dictyoglomus thermophilum H-6-12]
Swissprottr|Q9M5L0|RL35_EUPES6.00E-7760S ribosomal protein L35
trEMBLtr|I3S340|I3S340_LOTJA6.00E-76Uncharacterized protein {ECO:0000313|EMBL:AFK34682.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold005738113983008+


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000573s00021780.1PF00831.18Ribosomal_L297641.50E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control999.223
SRR1783600control1002.481
SRR1783602moderate drought stress992.714
SRR1811619moderate drought stress988.284

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain543.646
DRR006520Root Summer glycyrrhizin high producing strain538.540
DRR006521Root Winter glycyrrhizin high producing strain340.945
DRR006522Root Winter glycyrrhizin high producing strain331.667
DRR006523Root Summer glycyrrhizin low producing strain589.979
DRR006524Root Summer glycyrrhizin low producing strain589.861
DRR006525Leaf Summer glycyrrhizin high producing strain156.321
DRR006526Leaf Summer glycyrrhizin high producing strain155.771

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)571.270
SRR2868004Drought Stress (root)371.432
SRR2967015Control (root)344.384

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf230.550
SRR9715740Leaf176.379
SRR9715741Leaf175.848
SRR9715739Root619.214
SRR9715742Root409.607
SRR9715743Root450.139

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h575.265
SRR8749028MeJA induced 9h278.478
SRR8749029MeJA induced 9h335.783
SRR8749030Uninduced93.839
SRR8749031Uninduced52.673
SRR8749032Uninduced109.555

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root453.865
SRR8400027Control - Root399.629

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved