Gene detail information of Glyur000573s00021775 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39430.1 | 4.00E-34 | Disease resistance-responsive (dirigent-like protein) family protein |
| NR | KEH44500.1 | 1.68E-53 | disease resistance response/dirigent-like protein [Medicago truncatula] |
| Swissprot | tr|O80630|DIR9_ARATH | 8.00E-40 | Dirigent protein 9 (Precursor) |
| trEMBL | tr|A0A072W2N3|A0A072W2N3_MEDTR | 6.00E-54 | Disease resistance response/dirigent-like protein {ECO:0000313|EMBL:KEH44500.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00573 | 52201 | 52884 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000573s00021775.1 | PF03018.9 | Dirigent | 109 | 226 | 4.10E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.333 |
| SRR1783600 | control | 1.421 |
| SRR1783602 | moderate drought stress | 0.096 |
| SRR1811619 | moderate drought stress | 0.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.159 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.157 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.484 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.324 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.986 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.351 |
| SRR2868004 | Drought Stress (root) | 21.305 |
| SRR2967015 | Control (root) | 22.980 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.728 |
| SRR9715740 | Leaf | 3.830 |
| SRR9715741 | Leaf | 1.248 |
| SRR9715739 | Root | 2.063 |
| SRR9715742 | Root | 0.441 |
| SRR9715743 | Root | 0.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.036 |
| SRR8749028 | MeJA induced 9h | 0.158 |
| SRR8749029 | MeJA induced 9h | 0.052 |
| SRR8749030 | Uninduced | 0.012 |
| SRR8749031 | Uninduced | 0.064 |
| SRR8749032 | Uninduced | 0.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.147 |
| SRR8400027 | Control - Root | 2.128 |