Gene detail information of Glyur000572s00019046 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G35290.1 | 4.00E-21 | |
| NR | AFK47599.1 | 1.48E-69 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T507|I3T507_LOTJA | 6.00E-70 | Uncharacterized protein {ECO:0000313|EMBL:AFK47599.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00572 | 133318 | 133704 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.425 |
| SRR1783600 | control | 16.225 |
| SRR1783602 | moderate drought stress | 7.936 |
| SRR1811619 | moderate drought stress | 7.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 28.481 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.880 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.853 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.931 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 67.151 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 66.291 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.682 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.681 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.425 |
| SRR2868004 | Drought Stress (root) | 12.577 |
| SRR2967015 | Control (root) | 28.813 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 88.468 |
| SRR9715740 | Leaf | 70.757 |
| SRR9715741 | Leaf | 99.818 |
| SRR9715739 | Root | 66.052 |
| SRR9715742 | Root | 70.845 |
| SRR9715743 | Root | 69.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 92.555 |
| SRR8749028 | MeJA induced 9h | 144.577 |
| SRR8749029 | MeJA induced 9h | 147.146 |
| SRR8749030 | Uninduced | 355.050 |
| SRR8749031 | Uninduced | 240.155 |
| SRR8749032 | Uninduced | 127.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.023 |
| SRR8400027 | Control - Root | 16.727 |