Gene detail information of Glyur000572s00019033 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN42619.1 | 8.58E-26 | hypothetical protein glysoja_018862 [Glycine soja] |
| trEMBL | tr|I1J9K6|I1J9K6_SOYBN | 3.00E-26 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G40830.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00572 | 71131 | 74454 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 44.971 |
| SRR1783600 | control | 44.418 |
| SRR1783602 | moderate drought stress | 34.621 |
| SRR1811619 | moderate drought stress | 34.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 65.820 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 63.218 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 48.379 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 46.665 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 55.206 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 54.877 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.969 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 127.009 |
| SRR2868004 | Drought Stress (root) | 159.332 |
| SRR2967015 | Control (root) | 131.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 58.196 |
| SRR9715740 | Leaf | 49.391 |
| SRR9715741 | Leaf | 68.250 |
| SRR9715739 | Root | 35.350 |
| SRR9715742 | Root | 53.228 |
| SRR9715743 | Root | 48.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.277 |
| SRR8749028 | MeJA induced 9h | 37.090 |
| SRR8749029 | MeJA induced 9h | 50.108 |
| SRR8749030 | Uninduced | 64.020 |
| SRR8749031 | Uninduced | 74.081 |
| SRR8749032 | Uninduced | 78.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 108.938 |
| SRR8400027 | Control - Root | 123.531 |