Gene detail information of Glyur000571s00026044 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78780.4 | 8.00E-05 | pathogenesis-related family protein |
| NR | XP_007199060.1 | 1.26E-18 | hypothetical protein PRUPE_ppa018623mg [Prunus persica] |
| Swissprot | tr|P16273|PRPX_HORVU | 3.00E-13 | Pathogen-related protein |
| trEMBL | tr|M5VGR0|M5VGR0_PRUPE | 5.00E-19 | Uncharacterized protein {ECO:0000313|EMBL:EMJ00259.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00571 | 132706 | 133579 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.535 |
| SRR1783600 | control | 16.818 |
| SRR1783602 | moderate drought stress | 18.188 |
| SRR1811619 | moderate drought stress | 18.447 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.195 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.322 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.841 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.164 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.378 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.430 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 94.478 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 96.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 152.038 |
| SRR2868004 | Drought Stress (root) | 183.649 |
| SRR2967015 | Control (root) | 142.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 177.948 |
| SRR9715740 | Leaf | 222.302 |
| SRR9715741 | Leaf | 180.676 |
| SRR9715739 | Root | 25.830 |
| SRR9715742 | Root | 28.546 |
| SRR9715743 | Root | 29.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 107.490 |
| SRR8749028 | MeJA induced 9h | 198.175 |
| SRR8749029 | MeJA induced 9h | 117.973 |
| SRR8749030 | Uninduced | 382.722 |
| SRR8749031 | Uninduced | 338.811 |
| SRR8749032 | Uninduced | 230.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 89.887 |
| SRR8400027 | Control - Root | 64.687 |