Gene detail information of Glyur000571s00026038 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G77220.1 | 0 | Protein of unknown function (DUF300) |
| NR | XP_004502584.1 | 0 | PREDICTED: transmembrane protein 184C-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|K7KUP2|K7KUP2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G12830.5} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00571 | 73108 | 79484 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000571s00026038.1 | PF03619.11 | Solute_trans_a | 40 | 321 | 5.80E-105 |
| Glyur000571s00026038.3 | PF03619.11 | Solute_trans_a | 40 | 321 | 5.80E-105 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.935 |
| SRR1783600 | control | 1.029 |
| SRR1783602 | moderate drought stress | 0.966 |
| SRR1811619 | moderate drought stress | 0.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.366 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.521 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.765 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.817 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.815 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.730 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.877 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.936 |
| SRR2868004 | Drought Stress (root) | 10.765 |
| SRR2967015 | Control (root) | 9.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.234 |
| SRR9715740 | Leaf | 16.819 |
| SRR9715741 | Leaf | 18.258 |
| SRR9715739 | Root | 0.839 |
| SRR9715742 | Root | 3.769 |
| SRR9715743 | Root | 2.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.183 |
| SRR8749028 | MeJA induced 9h | 19.552 |
| SRR8749029 | MeJA induced 9h | 19.887 |
| SRR8749030 | Uninduced | 23.139 |
| SRR8749031 | Uninduced | 34.455 |
| SRR8749032 | Uninduced | 27.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.399 |
| SRR8400027 | Control - Root | 6.751 |