Gene detail information of Glyur000571s00026036 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G77122.1 | 3.00E-55 | Uncharacterised protein family UPF0090 |
| NR | XP_004502582.1 | 3.75E-85 | PREDICTED: uncharacterized protein LOC101490181 [Cicer arietinum] |
| trEMBL | tr|I1KAJ8|I1KAJ8_SOYBN | 2.00E-85 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G12810.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00571 | 57382 | 58266 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000571s00026036.1 | PF02576.12 | DUF150 | 6 | 105 | 1.30E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.219 |
| SRR1783600 | control | 0.447 |
| SRR1783602 | moderate drought stress | 0.075 |
| SRR1811619 | moderate drought stress | 0.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.501 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.788 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.291 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.611 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.057 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.302 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.165 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.318 |
| SRR2868004 | Drought Stress (root) | 0.618 |
| SRR2967015 | Control (root) | 0.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.091 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.050 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.023 |
| SRR9715743 | Root | 0.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.632 |
| SRR8749028 | MeJA induced 9h | 0.820 |
| SRR8749029 | MeJA induced 9h | 0.938 |
| SRR8749030 | Uninduced | 0.968 |
| SRR8749031 | Uninduced | 0.801 |
| SRR8749032 | Uninduced | 1.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.104 |
| SRR8400027 | Control - Root | 0.113 |