Gene detail information of Glyur000570s00022987 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G40460.1 | 1.00E-23 | |
| NR | XP_002521465.1 | 2.76E-45 | conserved hypothetical protein [Ricinus communis] |
| trEMBL | tr|B9S646|B9S646_RICCO | 1.00E-45 | Putative uncharacterized protein {ECO:0000313|EMBL:EEF40955.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00570 | 142715 | 143047 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.121 |
| SRR1783600 | control | 17.635 |
| SRR1783602 | moderate drought stress | 6.976 |
| SRR1811619 | moderate drought stress | 7.776 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.966 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.172 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.600 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.623 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.513 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.488 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.696 |
| SRR2868004 | Drought Stress (root) | 4.544 |
| SRR2967015 | Control (root) | 6.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.610 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.096 |
| SRR9715739 | Root | 2.647 |
| SRR9715742 | Root | 14.241 |
| SRR9715743 | Root | 14.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.598 |
| SRR8749028 | MeJA induced 9h | 13.089 |
| SRR8749029 | MeJA induced 9h | 19.746 |
| SRR8749030 | Uninduced | 1.391 |
| SRR8749031 | Uninduced | 6.180 |
| SRR8749032 | Uninduced | 6.420 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.509 |
| SRR8400027 | Control - Root | 8.506 |