Gene detail information of Glyur000570s00022978 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01550.1 | 5.00E-48 | phosphoenolpyruvate (pep)/phosphate translocator 2 |
| NR | NP_001242209.1 | 1.13E-88 | uncharacterized protein LOC100819280 [Glycine max] |
| Swissprot | tr|Q8H0T6|PPT2_ARATH | 2.00E-56 | Phosphoenolpyruvate/phosphate translocator 2, chloroplastic (Precursor) |
| trEMBL | tr|I1N5H8|I1N5H8_SOYBN | 1.00E-89 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G00270.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00570 | 96167 | 97416 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000570s00022978.1 | PF00892.15 | EamA | 140 | 236 | 8.10E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.638 |
| SRR1783600 | control | 1.585 |
| SRR1783602 | moderate drought stress | 0.844 |
| SRR1811619 | moderate drought stress | 0.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.610 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.530 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.152 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.253 |
| SRR2868004 | Drought Stress (root) | 2.168 |
| SRR2967015 | Control (root) | 1.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.755 |
| SRR9715740 | Leaf | 2.708 |
| SRR9715741 | Leaf | 5.060 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 2.092 |
| SRR9715743 | Root | 1.373 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.150 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.605 |
| SRR8400027 | Control - Root | 2.220 |