Gene detail

Gene detail information of Glyur000570s00022975.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G08850.1	0	Leucine-rich repeat receptor-like protein kinase family protein
NR	XP_004492922.1	0	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Cicer arietinum]
COG	YP_004775215.1	1.00E-62	RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprot	tr\|Q8VZG8\|Y4885_ARATH	0	Probable LRR receptor-like serine/threonine-protein kinase At4g08850 (Precursor)
trEMBL	tr\|I1N463\|I1N463_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G48590.1}

Sequence

Transcript Sequence

>Glyur000570s00022975.1
GCAAAACATATCTTTCCGCAAAAGCAATATGAATCGTGAAAAATGAGCTTTAATTAAGTGGAAGACAATATAATGCACACTTTGGAAAAATGTCTTCAGGAAAGCTCAGTTCATAAATTTTTATTGCCTTTGTGCAAGACTTACAAAAGTTGCGCAAGACTTGCAAAAGTGTGCTTTGTGTCCCCAATCACGCCGAACCTCCATCATCACCACACAATATATATAACATCCACTTGAAAGAATCTGCATCTGCATCCTTAGATTGAATCCTTGATCCAATAATCCTGTTATACTAACTTGAACCATGGCACCCATGTTTGAAAACGTAATATTCATCAAGAGTCTAGCGTGGTGGAGGATTCTCCTCATATTCCTTTGGATCCTTCTGCCACCCTCTATGCTTCAAGTTGCTGGTTTTTCCAAAACCGCTTCTTTGAGTTTGACCCATGCTGCCACAATTACTACTGTTCATGATCAAGCTGCAGTTGAAGACAGGGAAGCAAATGCTCTGTTGAAGTGGAAACACAGCCTTGACAATCACAGCCAAGCTCTCTTGTTAACTTGGACAGGTTCTAGTCCATGCAAATGGCAAGGAATTCAGTGTGACAAATCCAAGTCCGTCTCCAGCATAAACCTTGCAAATTATGGACTACAAGGTACACTCCACACACTCAGCTTCTCCTCATTTCCCAACCTCTTCAGCATAGATATCTTCGACAACCACTTTTATGGGACCATTCCCCCACAAATTGGCAACATATCCAAAGTAAATGTTTTGAACTTTTCTTTAAATTCTTTTGATGGTTCCATCCCAAAAGAAATGTGGACATTGAGGAGTTTACGTCGCCTTGATCTTTCTCAATGCCAACTAAGTGGAGAGATTCCTAGTTCCATAGGAAACTTGTCCAACCTAATATATCTGGATTTTGGTGAAAATAATCTTTCTGGCCACATTCCTCCAGAGATTGGGAAATTGAGCAACTTGAGGTATCTAACTATTTCTAATAATAAACTTTTGGGTGGTTCCATTCCTCTAGAAATTGGAATGTTGACAAACCTACCTGAAATTGATTTGTCAGGGAACTCTCTATCCGGTACTATCCCGGATACAATAGGTAACATGAGCAACTTAAATATACTTTACCTTTCTAACAACACCCGGTTGTCTGGGCCAATCCCTCCCTTCTTCTGGAACATGTCTAACTTGTCCTTGCTCTGGCTTGATAACAATAATTTTTCTGGACCAATCCCTGCTTCCATAGAAAACATGGCCAATGTTCATGATCTTGCACTTGATTACAACCACCTTTCTGGATCTATTCCTGTCACAATTGGGAACTTGACAAAGCTCAGGGCGTTGTACTTGCGCCATAATCATTTTTCTGGATCAATTCCTGCCTCCATAGGAAATCTAATCAATTTGGAGACCCTCAGTCTCCAAGATAACAATCTCAGTGGATCTATTCCTGTCACAATTGGAAATTTGACAAGGCTCACTATCTTGGAATTATCCACTAACAAACTTGGTGGTAGAATTCCACAGGTCCTGAATAACATTACAGCCTGGAAGACGTTGTTATTAGCCGAGAATGATTTCACTGGCTATATACCTCCTCAAATATGCTCTGGCAGGTCACTAGTAAACTTCAATGCTCATCACAACCATTTCACTGGCCCAGTACCACCAAGCTTGAAAAACTGCACTAGTATTAAAAGACTCAGGCTTGATGTAAATCAAATAGGAGGAGATATAGCACAAGATTTTGGTGTATATCCAAATTTGGAATACATTAATCTGACTGACAATAAATTTTATGGCCACATTTCACCAAACTGGGGGAAATGTCCTAATCTTGGTAGCTTCATAATATCCAACAATAATATTTCCGGCAATATACCAGTGGAACTTGTTGCGGCAAGCAAGCTAGGTAAGCTTCATCTTTCCTCGAATCACCTGACTGGGAAGCTTCCAAAGGAACTAGGAAACATGAAATCATTACTTGAAGTTAAGATCAGCAACAATCGTCTTTCAGGAAACATCCCAACTGAAATTGGATTATTACAGAATCTTGAAGAGCTGGATCTCGGAGGAAACATTTTGAGTGGCACAATAACAAAACAAGTTGTGATGTTACCCAAGTTACGGAACTTGAATTTGAGCAAAAACAAATTCGAGGGAAGCATTCCCTCGGAGTTTGGCCAATCACAACCTCTTGATTCTCTTGACCTTAGCTGGAATTTGTTGAGTGGAACAATACCAACAACGCTTGGAGACTTGAAGCAATTGCAATGGTTGAATCTGTCACGCAATAATCTCTCAGGCACCATTCCGTCCAGTTTTGATGACGTTAATGCCATGTCAAGCTTGACTTTTGTCGACATATCATACAACCAGCTTGAAGGGAGGCTTCCAAATAATAAAGCCTTTCTTAACGCTTCAATTGAATCGAACAAAGGTTTGTGTGGTAATCACACTGGCTTAGTGCTTTGCCCAACCAACCAAGGTCAGAAGAGCCACAAGGTCATCCTACTAGTATTGTTTGTCATCTTAGGTGCTCTTCTACTAGTCTTTTGTGGGGTGGGAGTTTCAATGTATATTCTTTGCCGGAGAGCAAGAAAGAAAGAAAGTGAGGATAAAGATTCTAAAGAAGGACAATCAGAAGAAGTCTTTTCCATATGGAGTCACGATGGAAAAATGGTATTTGAAAATATCATTGAAGCTACCAATAATTTTGATGACAAATATCTCATTGGAGTGGGAGGGCAAGGGTCTGTTTACAGGGCCAAGTTGGCTTCAGGTCTGGTTGTTGCTGTAAAGAAACTTCATTTGGGAACAGATGGAGAGAGGCCCAATTTCAAAGCTTTTGAAAATGAAATTCAGGCTTTGACAGAAATCAAGCATCGTAACATTATAAAGCTCTATGGATTTTGCTCACATTCGCGATTCTCATTTCTTGTTTACAAGTTCTTGGAAGGGGGAAATTTGGCTCAAATGCTCAACAATGACACAGCAGCAATTGAGTTTGATTGGGAAAGGAGGGTGAATGTTGTTAAAGGTGTGGCTAATGCTTTGTCCTATATGCATCATGACTGCTTACCTCCTATAGTTCATCGCGACATATCAAGCAAGAATGTTCTTTTGGATTTAGAATATGAAGCTCATCTTTCTGATTTTGGAACAGCCAAGTTTCTGAAGCCTGATTCACACACTTGGACGGCATTTGCAGGCACCTATGGGTACGCAGCTCCAGAGCTTGCCCAGACCATGCAAGTGAACGAGAAATGTGATGTTTTCAGCTTTGGAGTACTTTGTTTTGAAATCCTATTGGGAAAGCATCCAGGAGATCTCGTTTCTTCGTTGTTGTCACCATCTACTGCAAAGATGACTTATAACTTGCTGTTGATTGATGTGTTAGACCAACGCCCTCCTCTACCCAACAATTCAATTGCAGGGGATGTCATCTTGATTGCAAGGTTGGCATTGTCTTGCTTGAGTGAAAGTCCATCTTCTCGCCCAACCATGGAGCAAATATCTAAAGAACTTTTCATGAAAAAATCACCTTTAGCAGACCAGTTCCCTCGGTGCCACCACTGGAGGATTCACGTCCAGAGCTACTGCGAGGACCATTACCTGTCCTACAGGGTCAAGTCCCTTGCCAAATCAAGGAAATCCAAGGACGATGATGAAGAGAAGGAACAAGCCATTATTCCCCGGAGTGACCGCGCCAGAAAAAACTCCAAGAGGCTTCGAGAAGAGGAAGTGACCGTTACGGTGGAGAAGCGTCAGAAAACCGAAAAAAACAAAATGAAGAAGAAGGCGAAGAAGAAGGTCATGGCGAAACCAGAAGAATCTCGGAAGGAGGAATCTGAAGGAATGTCGCTACTACTGGACAGGAAATCCAGGAGCAGAGAGAAGATCAAGAGATTGCTTGAACTGCTTGATGAGAAACCAGTCACGAGGACAAGGTCTTCTTCCTCCAAAACCGAAAGACCAAACGCCTCTCTATCTCAGATGTGCCATCAGTGCCAGAGAAATGATAAGAGAGTCAGTCTACCGTGGTGGAGGATTCTCTTCATATTCCTTTGGATCCTTCTGCTACCCTCTTTGCTTCAAGTTGCTGGTTTTTCCAAAACCGCTTCTTTGAGTTTGACCCATGCTGCCACAATAACTACTGTTCATGATCAAGCTGCAGTTGAAGACAGGGAAGCAAATGCTCTGTTGAAATGGAAACACAGCCTTGACAATCACAGCCAAGCTCTCTTGTCAACTTGGACAGGTTCTAGTCCATGCAAATGGCAAGGAATTCAGTGTGACAAATCCAAGTCCGTCTCACGCATAAATCTTGCAAGTCATGGACTAAAAGGTACACTCCATAATCTCAGCTTCTCCTCATTCCCCAACCTCTTCAGCATAAATATCTACAGCAACTCCTTTTATGGGACCATTCCCCCACAAATTGCCAACATGTCCAAAGTAAATGTTTTGAACTTTTCTTTAAATTCTTTTGATGGTTCCATCCCAAAGGAAATGGGGACATTGAGGAGTTTACGTCGCCTTGATCTTTCTCTCTGTCAACTAAGTGGAGAGATTCCTAGCTCCATAGAAAACTTGGCCAATTTGAATGAACTTGCACTTGATAACAACCAACTTTCTGGACCTATTCCTTCCACCATTGGGAACTTGACAAAGCTCAGCAGGCTGTTCTTGGGCTTCAATAATTTTTCCGGATCAATTCCTGCCTCCATTGGAAATCTAATCAAATTGGAAGAACTCAGTCTCCAAGTTAACAATCTCACCGGATCTATTCCTGTCACAATTGGAAATTTGACCAGGCTCACTCTCTTCGAATTATCCACTAACAAACTTAGTGGTAGAATTTCACAGGTCCTGAATAACATGACAACCTTGCAAAGGTTGTCAATAGCCAGTAATGATTTCATCGGCTATATACCTCCTCAAATATGCTCTGGCGGGTCACTATTATACTTAAATGCTGAGCACAACCATTTCACGGGCCCAGTAAATCTAATAGGAGGAGATATAGCACAAGATTTCGGTGTATATCCAAATTTAAAATACATTGATCTGAGTGAAAATAAATTTTATGGCCAAATTTCACCAAACTGGGGGAAGTGTCCTAATCTTGGTAGCTTCACGATATCCAACAACAATATTTCCGGCGGTATACCAGTGGAACTTGTTGGGGCAACCAAGCTAGGTAAGCTTCATCTTTCTTCGAATCACCTTACTGGGAAGCTTCCAAAGGAACTAGGAAACCTGAAATCATTACTTGAAGTTAAGATCAGCAACAATAATCTTTCAGGAAACATTCCAATTGAAATTGGATTATTACAGAATCTTGAAGAGCTGGATCTCGGAGCAAACATGTTGAGTGGCACAATACCAAAACAAGTTGTGATGTTACCCAAGTTACGGAACTTGAATTTGAGCAAAAACAAATTCGAGGGAAGCATTCCCTCGGAGTTTGGCCAATCACAACCTCTTGATTCTCTTGACCTTAGCTCGAATTTGCTGAGTGGAACAATACCAACAACGCTAGGAGACTTGAAGCAACTGGAATCGCTGAATCTGTCATGCAATAATCTCTCTGGCACCATACCATCCAGTTTTGATGACGGCAATGGCATGACAAGCTTGACTTTTGTCAACATATCATACAACCAGCTAGAAGGGAGGCTTCCAAATAATAAAGCCTTTCTTAACGCTTCAATTGAATCTAACAAAGGTTCCGGAGCATGTGCAGAGTTCTCCAAACCATCAGCTGGTTCTTCATCAAGTTCCCCCTGA

Protein Sequence

>Glyur000570s00022975.1
MAPMFENVIFIKSLAWWRILLIFLWILLPPSMLQVAGFSKTASLSLTHAATITTVHDQAAVEDREANALLKWKHSLDNHSQALLLTWTGSSPCKWQGIQCDKSKSVSSINLANYGLQGTLHTLSFSSFPNLFSIDIFDNHFYGTIPPQIGNISKVNVLNFSLNSFDGSIPKEMWTLRSLRRLDLSQCQLSGEIPSSIGNLSNLIYLDFGENNLSGHIPPEIGKLSNLRYLTISNNKLLGGSIPLEIGMLTNLPEIDLSGNSLSGTIPDTIGNMSNLNILYLSNNTRLSGPIPPFFWNMSNLSLLWLDNNNFSGPIPASIENMANVHDLALDYNHLSGSIPVTIGNLTKLRALYLRHNHFSGSIPASIGNLINLETLSLQDNNLSGSIPVTIGNLTRLTILELSTNKLGGRIPQVLNNITAWKTLLLAENDFTGYIPPQICSGRSLVNFNAHHNHFTGPVPPSLKNCTSIKRLRLDVNQIGGDIAQDFGVYPNLEYINLTDNKFYGHISPNWGKCPNLGSFIISNNNISGNIPVELVAASKLGKLHLSSNHLTGKLPKELGNMKSLLEVKISNNRLSGNIPTEIGLLQNLEELDLGGNILSGTITKQVVMLPKLRNLNLSKNKFEGSIPSEFGQSQPLDSLDLSWNLLSGTIPTTLGDLKQLQWLNLSRNNLSGTIPSSFDDVNAMSSLTFVDISYNQLEGRLPNNKAFLNASIESNKGLCGNHTGLVLCPTNQGQKSHKVILLVLFVILGALLLVFCGVGVSMYILCRRARKKESEDKDSKEGQSEEVFSIWSHDGKMVFENIIEATNNFDDKYLIGVGGQGSVYRAKLASGLVVAVKKLHLGTDGERPNFKAFENEIQALTEIKHRNIIKLYGFCSHSRFSFLVYKFLEGGNLAQMLNNDTAAIEFDWERRVNVVKGVANALSYMHHDCLPPIVHRDISSKNVLLDLEYEAHLSDFGTAKFLKPDSHTWTAFAGTYGYAAPELAQTMQVNEKCDVFSFGVLCFEILLGKHPGDLVSSLLSPSTAKMTYNLLLIDVLDQRPPLPNNSIAGDVILIARLALSCLSESPSSRPTMEQISKELFMKKSPLADQFPRCHHWRIHVQSYCEDHYLSYRVKSLAKSRKSKDDDEEKEQAIIPRSDRARKNSKRLREEEVTVTVEKRQKTEKNKMKKKAKKKVMAKPEESRKEESEGMSLLLDRKSRSREKIKRLLELLDEKPVTRTRSSSSKTERPNASLSQMCHQCQRNDKRVSLPWWRILFIFLWILLLPSLLQVAGFSKTASLSLTHAATITTVHDQAAVEDREANALLKWKHSLDNHSQALLSTWTGSSPCKWQGIQCDKSKSVSRINLASHGLKGTLHNLSFSSFPNLFSINIYSNSFYGTIPPQIANMSKVNVLNFSLNSFDGSIPKEMGTLRSLRRLDLSLCQLSGEIPSSIENLANLNELALDNNQLSGPIPSTIGNLTKLSRLFLGFNNFSGSIPASIGNLIKLEELSLQVNNLTGSIPVTIGNLTRLTLFELSTNKLSGRISQVLNNMTTLQRLSIASNDFIGYIPPQICSGGSLLYLNAEHNHFTGPVNLIGGDIAQDFGVYPNLKYIDLSENKFYGQISPNWGKCPNLGSFTISNNNISGGIPVELVGATKLGKLHLSSNHLTGKLPKELGNLKSLLEVKISNNNLSGNIPIEIGLLQNLEELDLGANMLSGTIPKQVVMLPKLRNLNLSKNKFEGSIPSEFGQSQPLDSLDLSSNLLSGTIPTTLGDLKQLESLNLSCNNLSGTIPSSFDDGNGMTSLTFVNISYNQLEGRLPNNKAFLNASIESNKGSGACAEFSKPSAGSSSSSP

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00570	75937	93035	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.12.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000570s00022975.1	PF08263.7	LRRNT_2	64	101	1.00E-06
Glyur000570s00022975.1	PF13855.1	LRR_8	178	237	8.20E-10
Glyur000570s00022975.1	PF00560.28	LRR_1	275	297	0.42
Glyur000570s00022975.1	PF00560.28	LRR_1	348	370	0.23
Glyur000570s00022975.1	PF00560.28	LRR_1	372	394	0.28
Glyur000570s00022975.1	PF00560.28	LRR_1	612	632	0.67
Glyur000570s00022975.1	PF13855.1	LRR_8	637	698	6.70E-07
Glyur000570s00022975.1	PF00069.20	Pkinase	815	1081	7.80E-43
Glyur000570s00022975.1	PF08263.7	LRRNT_2	1300	1337	4.10E-07
Glyur000570s00022975.1	PF00560.28	LRR_1	1414	1436	0.16
Glyur000570s00022975.1	PF00560.28	LRR_1	1709	1729	0.67
Glyur000570s00022975.1	PF13855.1	LRR_8	1734	1795	1.60E-08

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.690
SRR1783600	control	2.662
SRR1783602	moderate drought stress	2.433
SRR1811619	moderate drought stress	2.548

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.057
DRR006520	Root Summer glycyrrhizin high producing strain	4.978
DRR006521	Root Winter glycyrrhizin high producing strain	0.082
DRR006522	Root Winter glycyrrhizin high producing strain	0.056
DRR006523	Root Summer glycyrrhizin low producing strain	2.332
DRR006524	Root Summer glycyrrhizin low producing strain	2.195
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.329
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.310

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.224
SRR2868004	Drought Stress (root)	6.415
SRR2967015	Control (root)	4.592

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.530
SRR9715740	Leaf	0.511
SRR9715741	Leaf	0.542
SRR9715739	Root	0.729
SRR9715742	Root	2.614
SRR9715743	Root	1.758

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.177
SRR8749028	MeJA induced 9h	0.107
SRR8749029	MeJA induced 9h	0.058
SRR8749030	Uninduced	0.149
SRR8749031	Uninduced	0.074
SRR8749032	Uninduced	0.037

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.653
SRR8400027	Control - Root	3.161