Gene detail information of Glyur000570s00022972 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006279716.1 | 3.17E-10 | hypothetical protein CARUB_v10027452mg [Capsella rubella] |
| trEMBL | tr|R0G7X5|R0G7X5_9BRAS | 1.00E-10 | Uncharacterized protein {ECO:0000313|EMBL:EOA12614.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00570 | 24407 | 25572 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 53.973 |
| SRR1783600 | control | 57.336 |
| SRR1783602 | moderate drought stress | 43.870 |
| SRR1811619 | moderate drought stress | 43.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.170 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.563 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.775 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.741 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.276 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.093 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.783 |
| SRR2868004 | Drought Stress (root) | 1.191 |
| SRR2967015 | Control (root) | 2.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.433 |
| SRR9715740 | Leaf | 0.267 |
| SRR9715741 | Leaf | 0.260 |
| SRR9715739 | Root | 4.798 |
| SRR9715742 | Root | 1.336 |
| SRR9715743 | Root | 1.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.481 |
| SRR8400027 | Control - Root | 2.949 |