Gene detail information of Glyur000570s00022971 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G04160.1 | 2.00E-178 | Subtilisin-like serine endopeptidase family protein |
| NR | XP_004492929.1 | 0 | PREDICTED: subtilisin-like protease-like isoform X1 [Cicer arietinum] |
| COG | YP_007562288.1 | 1.00E-94 | peptidase S08 family protein [Ilumatobacter coccineus YM16-304] |
| Swissprot | tr|I1N462|SBT1_SOYBN | 0 | Subtilase peptide GmSubPep (Precursor) |
| trEMBL | tr|G7KU92|G7KU92_MEDTR | 0 | Subtilisin-like serine protease {ECO:0000313|EMBL:AES80542.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00570 | 22540 | 35249 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000570s00022971.1 | PF05922.11 | Inhibitor_I9 | 51 | 134 | 3.70E-12 |
| Glyur000570s00022971.1 | PF00082.17 | Peptidase_S8 | 165 | 588 | 2.40E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 199.891 |
| SRR1783600 | control | 197.287 |
| SRR1783602 | moderate drought stress | 158.662 |
| SRR1811619 | moderate drought stress | 156.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 71.236 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 69.164 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.670 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.667 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.625 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.685 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 61.454 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 61.806 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 157.537 |
| SRR2868004 | Drought Stress (root) | 104.158 |
| SRR2967015 | Control (root) | 154.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 40.481 |
| SRR9715740 | Leaf | 3.182 |
| SRR9715741 | Leaf | 8.579 |
| SRR9715739 | Root | 269.815 |
| SRR9715742 | Root | 170.366 |
| SRR9715743 | Root | 182.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.058 |
| SRR8749028 | MeJA induced 9h | 0.014 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.013 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.311 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 163.157 |
| SRR8400027 | Control - Root | 161.422 |