Gene detail information of Glyur000569s00020987 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11000.1 | 4.00E-22 | Plant protein of unknown function (DUF868) |
| NR | XP_003553754.1 | 4.78E-133 | PREDICTED: uncharacterized protein LOC100780249 [Glycine max] |
| trEMBL | tr|I1NC75|I1NC75_SOYBN | 2.00E-133 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G43240.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00569 | 101731 | 102777 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000569s00020987.1 | PF05910.7 | DUF868 | 24 | 346 | 1.90E-55 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 54.567 |
| SRR1783600 | control | 53.970 |
| SRR1783602 | moderate drought stress | 32.601 |
| SRR1811619 | moderate drought stress | 32.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 71.939 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 71.925 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.983 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.933 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 35.673 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 35.529 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.705 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.757 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.929 |
| SRR2868004 | Drought Stress (root) | 8.323 |
| SRR2967015 | Control (root) | 13.907 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.858 |
| SRR9715740 | Leaf | 0.161 |
| SRR9715741 | Leaf | 0.556 |
| SRR9715739 | Root | 42.874 |
| SRR9715742 | Root | 7.173 |
| SRR9715743 | Root | 11.917 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 32.123 |
| SRR8749028 | MeJA induced 9h | 4.270 |
| SRR8749029 | MeJA induced 9h | 12.865 |
| SRR8749030 | Uninduced | 3.688 |
| SRR8749031 | Uninduced | 0.851 |
| SRR8749032 | Uninduced | 0.842 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.512 |
| SRR8400027 | Control - Root | 35.439 |