Gene detail information of Glyur000569s00020986


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G04880.13.00E-119DNA-damage-repair/toleration protein (DRT102)
NRBAE71305.10putative DNA-damage-repair/toleration protein DRT102 [Trifolium pratense]
COGYP_001520514.13.00E-25ribose 5-phosphate isomerase B [Acaryochloris marina MBIC11017]
Swissprottr|Q05212|DR102_ARATH2.00E-158DNA-damage-repair/toleration protein DRT102
trEMBLtr|Q2PEP7|Q2PEP7_TRIPR0Putative DNA-damage-repair/toleration protein DRT102 {ECO:0000313|EMBL:BAE71305.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold0056999690100616-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0016853  isomerase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000569s00020986.1PF02502.13LacAB_rpiB91364.30E-35
Glyur000569s00020986.1PF07883.6Cupin_22112737.40E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control62.634
SRR1783600control64.782
SRR1783602moderate drought stress110.924
SRR1811619moderate drought stress128.842

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain105.982
DRR006520Root Summer glycyrrhizin high producing strain107.036
DRR006521Root Winter glycyrrhizin high producing strain37.606
DRR006522Root Winter glycyrrhizin high producing strain38.853
DRR006523Root Summer glycyrrhizin low producing strain136.307
DRR006524Root Summer glycyrrhizin low producing strain135.840
DRR006525Leaf Summer glycyrrhizin high producing strain33.325
DRR006526Leaf Summer glycyrrhizin high producing strain33.509

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)48.654
SRR2868004Drought Stress (root)52.898
SRR2967015Control (root)39.318

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf41.906
SRR9715740Leaf48.189
SRR9715741Leaf46.791
SRR9715739Root184.081
SRR9715742Root110.010
SRR9715743Root123.514

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h55.428
SRR8749028MeJA induced 9h26.543
SRR8749029MeJA induced 9h32.484
SRR8749030Uninduced11.347
SRR8749031Uninduced2.477
SRR8749032Uninduced12.033

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root61.330
SRR8400027Control - Root72.756

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved