Gene detail information of Glyur000569s00020984 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G08630.1 | 6.00E-11 | Protein of unknown function (DUF3411) |
| NR | XP_010673873.1 | 4.88E-10 | PREDICTED: uncharacterized protein LOC104890182 [Beta vulgaris subsp. vulgaris] |
| trEMBL | tr|V4LFE8|V4LFE8_EUTSA | 2.00E-10 | Uncharacterized protein {ECO:0000313|EMBL:ESQ49210.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00569 | 97854 | 98944 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.477 |
| SRR1783600 | control | 2.335 |
| SRR1783602 | moderate drought stress | 3.738 |
| SRR1811619 | moderate drought stress | 3.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.491 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.699 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.382 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.366 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.202 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.363 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.735 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.650 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.463 |
| SRR2868004 | Drought Stress (root) | 1.464 |
| SRR2967015 | Control (root) | 1.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.570 |
| SRR9715740 | Leaf | 1.669 |
| SRR9715741 | Leaf | 2.324 |
| SRR9715739 | Root | 1.157 |
| SRR9715742 | Root | 1.201 |
| SRR9715743 | Root | 1.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.940 |
| SRR8749028 | MeJA induced 9h | 0.969 |
| SRR8749029 | MeJA induced 9h | 0.254 |
| SRR8749030 | Uninduced | 0.232 |
| SRR8749031 | Uninduced | 0.396 |
| SRR8749032 | Uninduced | 0.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.160 |
| SRR8400027 | Control - Root | 1.685 |